Variant report

rSNPs within LD-proxies of this variant (count:28)

rs_ID	r²[population]
rs10498531	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11844140	0.87[AMR][1000 genomes]
rs2094273	0.87[AMR][1000 genomes]
rs2094274	0.87[AMR][1000 genomes]
rs2182521	0.94[EUR][1000 genomes]
rs4293310	0.87[AMR][1000 genomes]
rs4508369	0.87[AMR][1000 genomes]
rs55702672	0.87[AMR][1000 genomes]
rs55813576	0.93[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs56011122	0.93[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs56019785	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs61982148	0.84[AMR][1000 genomes]
rs61982149	0.87[AMR][1000 genomes]
rs61982152	0.87[AMR][1000 genomes]
rs61982154	0.87[AMR][1000 genomes]
rs61982155	0.87[AMR][1000 genomes]
rs61982156	0.87[AMR][1000 genomes]
rs61983461	0.87[AMR][1000 genomes]
rs61983462	0.87[AMR][1000 genomes]
rs61983464	0.93[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs61983474	0.87[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs61983475	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs61983476	0.97[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs61983520	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7157732	0.90[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs72725783	0.87[AMR][1000 genomes]
rs72725796	0.87[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs72725797	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv456336	chr14:70081956-70574149	Enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Strong transcription Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	75 gene(s)	inside rSNPs	diseases
2	nsv565007	chr14:70081956-70574149	Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Enhancers Strong transcription Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	75 gene(s)	inside rSNPs	diseases
3	nsv832824	chr14:70320639-70511401	Enhancers Weak transcription Strong transcription Genic enhancers Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	11 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:70317200-70325600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr14:70318000-70323200	Enhancers	HepG2	liver
3	chr14:70319200-70323200	Enhancers	Brain Germinal Matrix	brain
4	chr14:70320200-70325400	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
5	chr14:70320800-70325600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
6	chr14:70321400-70326200	Weak transcription	Fetal Brain Male	brain
7	chr14:70322800-70323600	Enhancers	Brain Hippocampus Middle	brain
8	chr14:70323000-70323400	Enhancers	Placenta	Placenta

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