Variant report
Variant | rs62028171 |
---|---|
Chromosome Location | chr15:76976789-76976790 |
allele | A/G |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
No data |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs10519151 | 1.00[AMR][1000 genomes];0.80[EUR][1000 genomes] |
rs11072617 | 0.85[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs1111257 | 0.80[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs157780 | 0.80[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs1607016 | 0.88[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs166793 | 0.93[EUR][1000 genomes] |
rs16968254 | 1.00[ASN][1000 genomes] |
rs16968310 | 1.00[ASN][1000 genomes] |
rs16968311 | 0.80[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs16968316 | 0.82[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs16968319 | 0.83[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs16968335 | 0.82[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs16968336 | 0.83[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs16968364 | 0.87[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs16968467 | 1.00[AMR][1000 genomes];0.87[EUR][1000 genomes] |
rs16968532 | 1.00[AMR][1000 genomes];0.80[EUR][1000 genomes] |
rs16968536 | 1.00[AMR][1000 genomes];0.80[EUR][1000 genomes] |
rs16968557 | 1.00[AMR][1000 genomes];0.80[EUR][1000 genomes] |
rs17462564 | 0.83[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs1838051 | 0.85[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs2221866 | 1.00[AMR][1000 genomes];0.80[EUR][1000 genomes] |
rs2277891 | 0.84[AMR][1000 genomes] |
rs280006 | 0.98[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs280025 | 0.92[EUR][1000 genomes] |
rs280036 | 0.97[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs28429680 | 1.00[ASN][1000 genomes] |
rs28573845 | 0.82[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs28591605 | 0.88[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs28605733 | 0.85[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs28721404 | 0.85[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs28808106 | 0.85[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs28886726 | 0.85[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs3825892 | 1.00[AMR][1000 genomes];0.80[EUR][1000 genomes] |
rs55691654 | 0.85[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs55903433 | 0.88[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs56116678 | 1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs56381843 | 0.85[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs58265327 | 0.85[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs58908956 | 0.85[AMR][1000 genomes];0.92[EUR][1000 genomes] |
rs59195449 | 0.98[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs59570104 | 1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs59897136 | 1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs60963081 | 1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs62026890 | 1.00[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs62026892 | 0.98[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs62026893 | 1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs62026896 | 0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs62026900 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs62026901 | 0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs62026902 | 0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes] |
rs62026904 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs62026906 | 0.85[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs62027262 | 0.89[AMR][1000 genomes] |
rs62027263 | 0.89[AMR][1000 genomes] |
rs62028170 | 0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs62028172 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs62028173 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs62028174 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs62028175 | 0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs62028176 | 0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs62028177 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs62028178 | 0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs62028179 | 1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs62028180 | 0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs62028193 | 0.83[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs62028421 | 0.80[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs62028422 | 0.80[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs62028427 | 0.80[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs62028428 | 0.80[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs62028430 | 0.80[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs62028431 | 0.80[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs62028433 | 0.80[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs62028436 | 1.00[ASN][1000 genomes] |
rs62028437 | 0.80[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs62028439 | 0.80[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs62028724 | 0.85[AMR][1000 genomes];0.93[EUR][1000 genomes] |
rs62028726 | 1.00[AMR][1000 genomes];0.93[EUR][1000 genomes] |
rs62028727 | 1.00[AMR][1000 genomes];0.90[EUR][1000 genomes] |
rs62028729 | 0.85[AMR][1000 genomes];0.90[EUR][1000 genomes] |
rs62028730 | 1.00[AMR][1000 genomes];0.90[EUR][1000 genomes] |
rs62028733 | 1.00[AMR][1000 genomes];0.90[EUR][1000 genomes] |
rs62028734 | 0.85[AMR][1000 genomes];0.87[EUR][1000 genomes] |
rs62028735 | 1.00[AMR][1000 genomes];0.87[EUR][1000 genomes] |
rs62028737 | 1.00[AMR][1000 genomes];0.87[EUR][1000 genomes] |
rs62028740 | 0.94[AMR][1000 genomes] |
rs62028741 | 0.94[AMR][1000 genomes] |
rs62028743 | 0.83[AMR][1000 genomes];0.83[EUR][1000 genomes] |
rs62029174 | 0.81[AMR][1000 genomes];0.80[EUR][1000 genomes] |
rs62029175 | 1.00[AMR][1000 genomes] |
rs62029178 | 0.85[AMR][1000 genomes];0.80[EUR][1000 genomes] |
rs62029179 | 0.85[AMR][1000 genomes];0.80[EUR][1000 genomes] |
rs62029180 | 0.85[AMR][1000 genomes];0.80[EUR][1000 genomes] |
rs62029182 | 1.00[AMR][1000 genomes] |
rs62029183 | 0.85[AMR][1000 genomes];0.80[EUR][1000 genomes] |
rs62029184 | 0.85[AMR][1000 genomes];0.80[EUR][1000 genomes] |
rs62029186 | 0.83[AMR][1000 genomes];0.80[EUR][1000 genomes] |
rs62029187 | 1.00[AMR][1000 genomes];0.80[EUR][1000 genomes] |
rs62029188 | 0.83[AMR][1000 genomes];0.80[EUR][1000 genomes] |
rs62029189 | 1.00[AMR][1000 genomes];0.80[EUR][1000 genomes] |
rs62029190 | 0.85[AMR][1000 genomes];0.80[EUR][1000 genomes] |
rs62029192 | 1.00[AMR][1000 genomes];0.80[EUR][1000 genomes] |
rs62029194 | 1.00[AMR][1000 genomes];0.80[EUR][1000 genomes] |
rs62029195 | 0.94[AMR][1000 genomes] |
rs62029196 | 1.00[AMR][1000 genomes];0.80[EUR][1000 genomes] |
rs62029197 | 1.00[AMR][1000 genomes];0.80[EUR][1000 genomes] |
rs62029230 | 0.81[AMR][1000 genomes];0.80[EUR][1000 genomes] |
rs62029231 | 1.00[AMR][1000 genomes];0.80[EUR][1000 genomes] |
rs62029233 | 0.83[AMR][1000 genomes];0.80[EUR][1000 genomes] |
rs62029234 | 0.85[AMR][1000 genomes];0.80[EUR][1000 genomes] |
rs62029235 | 1.00[AMR][1000 genomes];0.80[EUR][1000 genomes] |
rs62029236 | 0.85[AMR][1000 genomes];0.80[EUR][1000 genomes] |
rs62029237 | 1.00[AMR][1000 genomes];0.80[EUR][1000 genomes] |
rs62029239 | 1.00[AMR][1000 genomes];0.80[EUR][1000 genomes] |
rs62029240 | 1.00[AMR][1000 genomes];0.80[EUR][1000 genomes] |
rs62029241 | 1.00[AMR][1000 genomes];0.80[EUR][1000 genomes] |
rs62029245 | 0.89[AMR][1000 genomes] |
rs62029247 | 0.89[AMR][1000 genomes] |
rs62029248 | 0.89[AMR][1000 genomes] |
rs62029249 | 0.89[AMR][1000 genomes] |
rs62029250 | 0.89[AMR][1000 genomes] |
rs62030360 | 0.83[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs62030361 | 0.86[AFR][1000 genomes];0.83[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs62030370 | 0.87[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs62030371 | 0.85[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs62030372 | 0.85[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs62030373 | 0.92[AFR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs62030374 | 0.92[AFR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs62030411 | 0.92[AFR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs62030412 | 0.92[AFR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs62030415 | 0.92[AFR][1000 genomes];0.89[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs62030416 | 0.92[AFR][1000 genomes];0.89[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs62030417 | 1.00[ASN][1000 genomes] |
rs62030424 | 0.86[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs62030427 | 0.98[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs6495214 | 0.81[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs7171104 | 0.85[AMR][1000 genomes];0.80[EUR][1000 genomes] |
rs731731 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs73455381 | 0.85[AMR][1000 genomes];0.80[EUR][1000 genomes] |
rs73457161 | 0.81[AMR][1000 genomes] |
rs74024121 | 1.00[ASN][1000 genomes] |
rs74024154 | 0.88[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs8023896 | 0.85[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs8034637 | 0.85[AMR][1000 genomes];0.90[EUR][1000 genomes] |
rs8038119 | 0.98[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs8038984 | 0.88[EUR][1000 genomes] |
rs8039601 | 0.83[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs8041308 | 0.82[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs8042889 | 1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs8043385 | 0.81[AMR][1000 genomes];0.88[EUR][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv542439 | chr15:76762161-77196336 | Enhancers Weak transcription Strong transcription ZNF genes & repeats Flanking Active TSS Active TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 9 gene(s) | inside rSNPs | diseases |
2 | esv3440794 | chr15:76764595-77571114 | Weak transcription Enhancers Strong transcription Active TSS Flanking Active TSS Genic enhancers ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site | 25 gene(s) | inside rSNPs | diseases |
3 | nsv904400 | chr15:76772062-77085283 | Strong transcription Weak transcription Genic enhancers ZNF genes & repeats Enhancers Active TSS Flanking Active TSS | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 4 gene(s) | inside rSNPs | diseases |
4 | nsv1053924 | chr15:76803849-77089079 | Enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Weak transcription Active TSS Genic enhancers | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 4 gene(s) | inside rSNPs | diseases |
5 | nsv471254 | chr15:76811390-76978139 | Enhancers Strong transcription Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS Genic enhancers | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 2 gene(s) | inside rSNPs | diseases |
6 | nsv570021 | chr15:76813920-76978139 | Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Strong transcription Active TSS Genic enhancers | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 2 gene(s) | inside rSNPs | diseases |
7 | nsv570022 | chr15:76816015-76978139 | ZNF genes & repeats Strong transcription Weak transcription Enhancers Genic enhancers Flanking Active TSS Active TSS | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 2 gene(s) | inside rSNPs | diseases |
8 | nsv904401 | chr15:76816015-77085283 | Strong transcription Enhancers ZNF genes & repeats Weak transcription Flanking Active TSS Genic enhancers Active TSS | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 4 gene(s) | inside rSNPs | diseases |
9 | nsv1042089 | chr15:76855098-77016127 | Weak transcription Enhancers ZNF genes & repeats Genic enhancers Strong transcription Flanking Active TSS Active TSS | TF binding regionCpG islandChromatin interactive regionmiRNA | 2 gene(s) | inside rSNPs | diseases |
10 | esv2830013 | chr15:76863023-77176158 | Weak transcription ZNF genes & repeats Strong transcription Enhancers Flanking Active TSS Genic enhancers Active TSS | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 4 gene(s) | inside rSNPs | diseases |
11 | nsv1042623 | chr15:76863437-76999030 | Weak transcription Enhancers Strong transcription ZNF genes & repeats Flanking Active TSS Active TSS Genic enhancers | TF binding regionCpG islandChromatin interactive regionmiRNA | 2 gene(s) | inside rSNPs | diseases |
12 | nsv1039269 | chr15:76863437-77057021 | Weak transcription Strong transcription Enhancers ZNF genes & repeats Flanking Active TSS Genic enhancers Active TSS | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 4 gene(s) | inside rSNPs | diseases |
13 | nsv904404 | chr15:76869929-77033934 | Strong transcription ZNF genes & repeats Weak transcription Enhancers Flanking Active TSS Genic enhancers Active TSS | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 3 gene(s) | inside rSNPs | diseases |
14 | nsv904405 | chr15:76869929-77047915 | Weak transcription Enhancers Strong transcription ZNF genes & repeats Genic enhancers Active TSS Flanking Active TSS | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 4 gene(s) | inside rSNPs | diseases |
15 | nsv904406 | chr15:76869929-77085283 | Weak transcription Strong transcription ZNF genes & repeats Enhancers Genic enhancers Flanking Active TSS Active TSS | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 4 gene(s) | inside rSNPs | diseases |
16 | nsv904407 | chr15:76869929-77121196 | Weak transcription Strong transcription Active TSS ZNF genes & repeats Enhancers Flanking Active TSS Genic enhancers | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 4 gene(s) | inside rSNPs | diseases |
17 | nsv570023 | chr15:76884127-76978139 | Weak transcription Enhancers Strong transcription ZNF genes & repeats Genic enhancers Active TSS Flanking Active TSS | TF binding regionCpG islandChromatin interactive region | 1 gene(s) | inside rSNPs | diseases |
18 | nsv904408 | chr15:76884127-77085283 | Enhancers Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Flanking Active TSS Active TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 3 gene(s) | inside rSNPs | diseases |
19 | nsv1046858 | chr15:76892097-77020971 | Weak transcription Strong transcription ZNF genes & repeats Enhancers Flanking Active TSS Genic enhancers Active TSS | TF binding regionCpG islandChromatin interactive region | 1 gene(s) | inside rSNPs | diseases |
20 | nsv542440 | chr15:76892097-77020971 | Weak transcription ZNF genes & repeats Strong transcription Enhancers Genic enhancers Active TSS Flanking Active TSS | TF binding regionCpG islandChromatin interactive region | 1 gene(s) | inside rSNPs | diseases |
21 | nsv1043066 | chr15:76892097-77057021 | Weak transcription ZNF genes & repeats Strong transcription Enhancers Flanking Active TSS Active TSS Genic enhancers | TF binding regionCpG islandChromatin interactive regionlncRNA | 3 gene(s) | inside rSNPs | diseases |
22 | nsv542441 | chr15:76892097-77057021 | Weak transcription ZNF genes & repeats Strong transcription Enhancers Genic enhancers Flanking Active TSS Active TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 3 gene(s) | inside rSNPs | diseases |
23 | nsv1046137 | chr15:76892097-77196336 | ZNF genes & repeats Strong transcription Weak transcription Enhancers Flanking Active TSS Genic enhancers Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 7 gene(s) | inside rSNPs | diseases |
24 | nsv542442 | chr15:76892097-77196336 | ZNF genes & repeats Strong transcription Weak transcription Enhancers Genic enhancers Flanking Active TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 7 gene(s) | inside rSNPs | diseases |
25 | nsv904409 | chr15:76893186-77033934 | Strong transcription ZNF genes & repeats Weak transcription Enhancers Genic enhancers Active TSS Flanking Active TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 2 gene(s) | inside rSNPs | diseases |
26 | nsv904410 | chr15:76893186-77047915 | ZNF genes & repeats Enhancers Strong transcription Active TSS Genic enhancers Weak transcription Flanking Active TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 3 gene(s) | inside rSNPs | diseases |
27 | nsv904411 | chr15:76893186-77085283 | Weak transcription ZNF genes & repeats Strong transcription Enhancers Genic enhancers Active TSS Flanking Active TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 3 gene(s) | inside rSNPs | diseases |
28 | nsv570109 | chr15:76907376-76978139 | Weak transcription Enhancers ZNF genes & repeats Strong transcription Active TSS Genic enhancers Flanking Active TSS | TF binding regionChromatin interactive region | 1 gene(s) | inside rSNPs | diseases |
29 | nsv904412 | chr15:76910031-77085283 | Weak transcription ZNF genes & repeats Strong transcription Enhancers Genic enhancers Flanking Active TSS Active TSS | TF binding regionChromatin interactive regionlncRNA | 3 gene(s) | inside rSNPs | diseases |
30 | nsv904413 | chr15:76923917-76995150 | ZNF genes & repeats Strong transcription Weak transcription Enhancers Genic enhancers Flanking Active TSS Active TSS | TF binding regionChromatin interactive region | 1 gene(s) | inside rSNPs | diseases |
31 | nsv457206 | chr15:76971456-77121196 | Strong transcription Weak transcription ZNF genes & repeats Active TSS Enhancers Genic enhancers Flanking Active TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 3 gene(s) | inside rSNPs | diseases |
32 | nsv570110 | chr15:76971456-77121196 | Weak transcription Strong transcription ZNF genes & repeats Enhancers Genic enhancers Flanking Active TSS Active TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 3 gene(s) | inside rSNPs | diseases |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr15:76882200-76991400 | Weak transcription | Primary mononuclear cells fromperipheralblood | Blood |
2 | chr15:76898400-76981000 | Weak transcription | Pancreas | Pancrea |
3 | chr15:76902600-76992000 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
4 | chr15:76911400-76990800 | Weak transcription | Placenta | Placenta |
5 | chr15:76936600-76991800 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
6 | chr15:76940200-76991800 | Weak transcription | Left Ventricle | heart |
7 | chr15:76941400-76991600 | Weak transcription | Stomach Smooth Muscle | stomach |
8 | chr15:76942400-76991800 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
9 | chr15:76947400-76991600 | Weak transcription | Primary T cells fromperipheralblood | blood |
10 | chr15:76947400-76991600 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
11 | chr15:76954200-76992000 | Weak transcription | Rectal Smooth Muscle | rectum |
12 | chr15:76957600-76991600 | Weak transcription | Liver | Liver |
13 | chr15:76957800-76991200 | Weak transcription | Primary T cells from cord blood | blood |
14 | chr15:76961200-76992000 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
15 | chr15:76972400-76991400 | Weak transcription | Primary T helper cells PMA-I stimulated | -- |
16 | chr15:76972600-76991600 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
17 | chr15:76972600-76991800 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
18 | chr15:76973200-76991600 | Weak transcription | Primary B cells from cord blood | blood |
19 | chr15:76973200-76991800 | Weak transcription | Aorta | Aorta |
20 | chr15:76975000-76991800 | Weak transcription | Thymus | Thymus |
21 | chr15:76975200-76979800 | Weak transcription | Fetal Intestine Small | intestine |
22 | chr15:76975200-76991800 | Weak transcription | Fetal Stomach | stomach |
23 | chr15:76976200-76976800 | ZNF genes & repeats | Breast Myoepithelial Primary Cells | Breast |