The 2.0 version of rSNPBase

Variant report

Variant rs62028374
Chromosome Location chr15:76648459-76648460
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:76639800-76659800 Weak transcription Gastric stomach
2 chr15:76639800-76682600 Weak transcription Pancreas Pancrea
3 chr15:76639800-76695400 Weak transcription Spleen Spleen
4 chr15:76639800-76727400 Weak transcription Right Ventricle heart
5 chr15:76640200-76658800 Weak transcription Duodenum Mucosa Duodenum
6 chr15:76640400-76648800 Weak transcription Rectal Smooth Muscle rectum
7 chr15:76640800-76664400 Weak transcription Brain Angular Gyrus brain
8 chr15:76640800-76694600 Weak transcription Primary T helper naive cells fromperipheralblood blood
9 chr15:76641200-76659000 Weak transcription Primary T helper cells PMA-I stimulated --
10 chr15:76641400-76694600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
11 chr15:76641600-76651400 Weak transcription Brain Germinal Matrix brain
12 chr15:76641600-76665400 Weak transcription Placenta Placenta
13 chr15:76641800-76651200 Weak transcription Fetal Intestine Small intestine
14 chr15:76641800-76660400 Weak transcription Brain Inferior Temporal Lobe brain
15 chr15:76641800-76673400 Weak transcription Primary T killer naive cells fromperipheralblood blood
16 chr15:76642000-76660400 Weak transcription Esophagus oesophagus
17 chr15:76642200-76652800 Weak transcription Left Ventricle heart
18 chr15:76642200-76664400 Weak transcription Primary T regulatory cells fromperipheralblood blood
19 chr15:76642400-76648800 Weak transcription Fetal Heart heart
20 chr15:76642400-76660400 Weak transcription Brain Hippocampus Middle brain
21 chr15:76642800-76664600 Weak transcription Thymus Thymus
22 chr15:76642800-76693800 Weak transcription Brain Cingulate Gyrus brain
23 chr15:76643200-76651200 Weak transcription Adipose Nuclei Adipose
24 chr15:76643800-76672400 Weak transcription Primary B cells from cord blood blood
25 chr15:76643800-76695000 Weak transcription Primary hematopoietic stem cells blood
26 chr15:76644600-76664400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
27 chr15:76644600-76664600 Weak transcription Fetal Muscle Trunk muscle
28 chr15:76644800-76664600 Weak transcription Primary B cells from peripheral blood blood
29 chr15:76645800-76686200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
30 chr15:76646600-76651200 Weak transcription Breast Myoepithelial Primary Cells Breast
31 chr15:76646600-76651600 Weak transcription Aorta Aorta
32 chr15:76646600-76664400 Weak transcription Fetal Intestine Large intestine
33 chr15:76646600-76695400 Weak transcription Ovary ovary
34 chr15:76646800-76659200 Weak transcription Liver Liver
35 chr15:76646800-76659400 Weak transcription Stomach Smooth Muscle stomach
36 chr15:76646800-76666000 Weak transcription Fetal Brain Female brain
37 chr15:76647000-76656000 Weak transcription Fetal Stomach stomach
38 chr15:76647000-76660200 Weak transcription Duodenum Smooth Muscle Duodenum
39 chr15:76647000-76664600 Weak transcription Primary T helper cells fromperipheralblood blood
40 chr15:76648400-76648600 Enhancers Rectal Mucosa Donor 31 rectum
41 chr15:76648400-76652800 Strong transcription Primary T cells from cord blood blood
42 chr15:76648400-76668400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
43 chr15:76648400-76674400 Weak transcription Brain Substantia Nigra brain

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Last update: Aug 31, 2015