The 2.0 version of rSNPBase

Variant report

Variant rs62028381
Chromosome Location chr15:76669074-76669075
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:84 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:76639800-76682600 Weak transcription Pancreas Pancrea
2 chr15:76639800-76695400 Weak transcription Spleen Spleen
3 chr15:76639800-76727400 Weak transcription Right Ventricle heart
4 chr15:76640800-76694600 Weak transcription Primary T helper naive cells fromperipheralblood blood
5 chr15:76641400-76694600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
6 chr15:76641800-76673400 Weak transcription Primary T killer naive cells fromperipheralblood blood
7 chr15:76642800-76693800 Weak transcription Brain Cingulate Gyrus brain
8 chr15:76643800-76672400 Weak transcription Primary B cells from cord blood blood
9 chr15:76643800-76695000 Weak transcription Primary hematopoietic stem cells blood
10 chr15:76645800-76686200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
11 chr15:76646600-76695400 Weak transcription Ovary ovary
12 chr15:76648400-76674400 Weak transcription Brain Substantia Nigra brain
13 chr15:76650800-76674000 Weak transcription Small Intestine intestine
14 chr15:76652400-76675200 Weak transcription Brain Germinal Matrix brain
15 chr15:76653400-76672400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
16 chr15:76657400-76674000 Weak transcription Primary T cells fromperipheralblood blood
17 chr15:76660000-76670800 Weak transcription Fetal Thymus thymus
18 chr15:76660200-76674400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
19 chr15:76660600-76674000 Weak transcription Skeletal Muscle Male skeletal muscle
20 chr15:76660800-76669200 Weak transcription Stomach Mucosa stomach
21 chr15:76660800-76693600 Weak transcription Duodenum Smooth Muscle Duodenum
22 chr15:76661000-76669200 Weak transcription Fetal Lung lung
23 chr15:76661000-76670200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
24 chr15:76661000-76670200 Weak transcription Esophagus oesophagus
25 chr15:76661000-76674200 Weak transcription Lung lung
26 chr15:76661000-76675600 Weak transcription Colon Smooth Muscle Colon
27 chr15:76661000-76676400 Weak transcription Pancreatic Islets Pancreatic Islet
28 chr15:76661000-76685800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
29 chr15:76661000-76695200 Weak transcription Sigmoid Colon Sigmoid Colon
30 chr15:76661000-76695400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
31 chr15:76661000-76695400 Weak transcription Skeletal Muscle Female skeletal muscle
32 chr15:76661000-76708600 Weak transcription Brain Anterior Caudate brain
33 chr15:76661200-76675400 Weak transcription Placenta Amnion Placenta Amnion
34 chr15:76661200-76698000 Weak transcription Rectal Smooth Muscle rectum
35 chr15:76661200-76710800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
36 chr15:76661600-76698000 Weak transcription Dnd41 blood
37 chr15:76662200-76674800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
38 chr15:76662400-76679000 Weak transcription Rectal Mucosa Donor 29 rectum
39 chr15:76662400-76695400 Weak transcription Rectal Mucosa Donor 31 rectum
40 chr15:76662800-76679200 Weak transcription Primary monocytes fromperipheralblood blood
41 chr15:76663000-76669200 Weak transcription HepG2 liver
42 chr15:76663000-76670000 Weak transcription Primary hematopoietic stem cells short term culture blood
43 chr15:76664600-76669400 Strong transcription Primary mononuclear cells fromperipheralblood Blood
44 chr15:76664800-76698000 Weak transcription Brain Hippocampus Middle brain
45 chr15:76665400-76674800 Weak transcription Primary T helper cells PMA-I stimulated --
46 chr15:76665600-76669400 Strong transcription Fetal Intestine Small intestine
47 chr15:76666200-76671800 Weak transcription Breast Myoepithelial Primary Cells Breast
48 chr15:76666200-76673600 Weak transcription Primary T regulatory cells fromperipheralblood blood
49 chr15:76666200-76673800 Weak transcription Aorta Aorta
50 chr15:76666200-76674400 Weak transcription Monocytes-CD14+_RO01746 blood

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015