The 2.0 version of rSNPBase

Variant report

Variant rs62028726
Chromosome Location chr15:77034207-77034208
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:86 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:76989600-77055800 Weak transcription Primary T helper naive cells from peripheral blood blood
2 chr15:76992400-77056200 Weak transcription Colon Smooth Muscle Colon
3 chr15:76992400-77056200 Weak transcription Rectal Mucosa Donor 31 rectum
4 chr15:76992800-77056000 Weak transcription Right Ventricle heart
5 chr15:76993200-77056200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
6 chr15:76994200-77056000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
7 chr15:77008800-77037400 Weak transcription Fetal Brain Male brain
8 chr15:77012800-77056200 Weak transcription Primary T killer naive cells fromperipheralblood blood
9 chr15:77016600-77056000 Weak transcription Primary T killer memory cells from peripheral blood blood
10 chr15:77017600-77054400 Weak transcription HSMMtube muscle
11 chr15:77018200-77051600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
12 chr15:77021000-77054200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
13 chr15:77021000-77055800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
14 chr15:77021000-77056000 Weak transcription Skeletal Muscle Male skeletal muscle
15 chr15:77021600-77038600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
16 chr15:77022600-77039800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
17 chr15:77022800-77036000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
18 chr15:77023200-77056000 Weak transcription Muscle Satellite Cultured Cells --
19 chr15:77023400-77056000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
20 chr15:77023600-77056400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
21 chr15:77025200-77056400 Weak transcription Hela-S3 cervix
22 chr15:77025400-77039800 Weak transcription Rectal Mucosa Donor 29 rectum
23 chr15:77025400-77056400 Weak transcription Esophagus oesophagus
24 chr15:77025600-77036200 Weak transcription Psoas Muscle Psoas
25 chr15:77025600-77039800 Weak transcription Thymus Thymus
26 chr15:77025600-77040000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
27 chr15:77025600-77040000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
28 chr15:77025600-77040000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
29 chr15:77025600-77040000 Weak transcription Pancreas Pancrea
30 chr15:77025600-77040000 Weak transcription Spleen Spleen
31 chr15:77025600-77045600 Weak transcription Primary neutrophils fromperipheralblood blood
32 chr15:77025600-77054600 Weak transcription Brain Inferior Temporal Lobe brain
33 chr15:77025600-77055400 Weak transcription Placenta Amnion Placenta Amnion
34 chr15:77025600-77056000 Weak transcription Stomach Smooth Muscle stomach
35 chr15:77025600-77056400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
36 chr15:77025600-77056400 Weak transcription Gastric stomach
37 chr15:77025600-77056400 Weak transcription Lung lung
38 chr15:77025600-77056400 Weak transcription Rectal Smooth Muscle rectum
39 chr15:77025800-77035600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
40 chr15:77025800-77039400 Weak transcription Brain Anterior Caudate brain
41 chr15:77025800-77056000 Weak transcription Primary T helper naive cells fromperipheralblood blood
42 chr15:77025800-77056200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
43 chr15:77026200-77052800 Weak transcription Primary T helper cells PMA-I stimulated --
44 chr15:77030200-77036000 Weak transcription Fetal Muscle Leg muscle
45 chr15:77030200-77055400 Weak transcription Fetal Kidney kidney
46 chr15:77030600-77036000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
47 chr15:77030600-77036800 Weak transcription Primary B cells from cord blood blood
48 chr15:77030600-77052200 Weak transcription Brain Angular Gyrus brain
49 chr15:77030800-77035600 Weak transcription Fetal Muscle Trunk muscle
50 chr15:77030800-77036000 Weak transcription Sigmoid Colon Sigmoid Colon

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Last update: Aug 31, 2015