Variant report

Variant rs62043806
Chromosome Location chr15:56187078-56187079
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:39 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:56172800-56189600 Weak transcription Placenta Placenta
2 chr15:56175800-56189400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
3 chr15:56176000-56216200 Weak transcription Fetal Intestine Small intestine
4 chr15:56181800-56188800 Weak transcription HMEC breast
5 chr15:56185000-56189600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
6 chr15:56185200-56187800 Active TSS Skeletal Muscle Male skeletal muscle
7 chr15:56185400-56189600 Enhancers Hela-S3 cervix
8 chr15:56186200-56187600 Active TSS A549 lung
9 chr15:56186200-56188200 Active TSS Psoas Muscle Psoas
10 chr15:56186200-56188400 Enhancers Primary T cells from cord blood blood
11 chr15:56186200-56188400 Active TSS Skeletal Muscle Female skeletal muscle
12 chr15:56186400-56187600 Active TSS Breast Myoepithelial Primary Cells Breast
13 chr15:56186400-56187600 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
14 chr15:56186400-56187600 Flanking Active TSS HUVEC blood vessel
15 chr15:56186400-56187800 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
16 chr15:56186400-56187800 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
17 chr15:56186400-56187800 Active TSS Right Atrium heart
18 chr15:56186400-56188000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
19 chr15:56186400-56189800 Weak transcription Small Intestine intestine
20 chr15:56186600-56187800 Weak transcription Left Ventricle heart
21 chr15:56186600-56188000 Enhancers Primary T helper cells PMA-I stimulated --
22 chr15:56186600-56188400 Enhancers Dnd41 blood
23 chr15:56186600-56188800 Enhancers Primary hematopoietic stem cells short term culture blood
24 chr15:56186800-56187200 Enhancers GM12878-XiMat blood
25 chr15:56186800-56187200 Active TSS Osteobl bone
26 chr15:56186800-56188000 Enhancers Muscle Satellite Cultured Cells --
27 chr15:56186800-56188000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
28 chr15:56186800-56189400 Weak transcription HSMM muscle
29 chr15:56186800-56189600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
30 chr15:56186800-56189600 Weak transcription HSMMtube muscle
31 chr15:56186800-56189800 Weak transcription Stomach Mucosa stomach
32 chr15:56187000-56187200 Flanking Active TSS Primary hematopoietic stem cells blood
33 chr15:56187000-56187200 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
34 chr15:56187000-56187400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
35 chr15:56187000-56188000 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
36 chr15:56187000-56189400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
37 chr15:56187000-56189600 Weak transcription NH-A brain
38 chr15:56187000-56189600 Weak transcription NHDF-Ad bronchial
39 chr15:56187000-56189600 Enhancers NHEK skin

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