Variant report

Variant rs62056779
Chromosome Location chr17:43971937-43971938
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:43971000-43972000 Active TSS Stomach Smooth Muscle stomach
2 chr17:43971000-43972200 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
3 chr17:43971000-43972200 Active TSS Duodenum Smooth Muscle Duodenum
4 chr17:43971000-43972200 Bivalent/Poised TSS Stomach Mucosa stomach
5 chr17:43971000-43972200 Bivalent/Poised TSS NHEK skin
6 chr17:43971000-43972400 Active TSS Colon Smooth Muscle Colon
7 chr17:43971000-43972600 Bivalent/Poised TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
8 chr17:43971000-43972600 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
9 chr17:43971000-43974200 Active TSS Brain Anterior Caudate brain
10 chr17:43971000-43974200 Active TSS Brain Hippocampus Middle brain
11 chr17:43971000-43974800 Active TSS Brain Dorsolateral Prefrontal Cortex brain
12 chr17:43971000-43974800 Active TSS Brain Substantia Nigra brain
13 chr17:43971000-43975400 Bivalent/Poised TSS iPS-18 Cell Line embryonic stem cell
14 chr17:43971200-43972000 Active TSS Primary T helper naive cells fromperipheralblood blood
15 chr17:43971200-43972000 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
16 chr17:43971200-43972000 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
17 chr17:43971200-43972000 Bivalent/Poised TSS Foreskin Melanocyte Primary Cells skin03 Skin
18 chr17:43971200-43972000 Active TSS Duodenum Mucosa Duodenum
19 chr17:43971200-43972000 Active TSS Fetal Brain Female brain
20 chr17:43971200-43972000 Bivalent/Poised TSS Fetal Thymus thymus
21 chr17:43971200-43972000 Active TSS Rectal Mucosa Donor 31 rectum
22 chr17:43971200-43972000 Active TSS Rectal Smooth Muscle rectum
23 chr17:43971200-43972200 Active TSS Primary Natural Killer cells fromperipheralblood blood
24 chr17:43971200-43972200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
25 chr17:43971200-43972200 Bivalent/Poised TSS Fetal Intestine Large intestine
26 chr17:43971200-43972200 Bivalent/Poised TSS Fetal Intestine Small intestine
27 chr17:43971200-43972200 Bivalent/Poised TSS Fetal Muscle Leg muscle
28 chr17:43971200-43972200 Bivalent/Poised TSS Fetal Stomach stomach
29 chr17:43971200-43972200 Active TSS Ovary ovary
30 chr17:43971200-43972400 Bivalent/Poised TSS H1 Cell Line embryonic stem cell
31 chr17:43971200-43972400 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
32 chr17:43971200-43972400 Active TSS Primary T helper 17 cells PMA-I stimulated --
33 chr17:43971200-43972400 Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
34 chr17:43971200-43972600 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
35 chr17:43971200-43972600 Active TSS Fetal Kidney kidney
36 chr17:43971200-43972600 Active TSS HSMMtube muscle
37 chr17:43971200-43972800 Flanking Active TSS Primary T helper cells PMA-I stimulated --
38 chr17:43971200-43972800 Flanking Active TSS Liver Liver
39 chr17:43971200-43973000 Active TSS Primary T killer memory cells from peripheral blood blood
40 chr17:43971200-43973200 Bivalent/Poised TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
41 chr17:43971200-43973200 Active TSS Primary T helper naive cells from peripheral blood blood
42 chr17:43971200-43973200 Flanking Bivalent TSS/Enh Monocytes-CD14+_RO01746 blood
43 chr17:43971200-43973600 Bivalent/Poised TSS iPS-20b Cell Line embryonic stem cell
44 chr17:43971200-43974200 Flanking Active TSS Primary T helper cells fromperipheralblood blood
45 chr17:43971200-43974200 Active TSS Brain Inferior Temporal Lobe brain
46 chr17:43971200-43975000 Active TSS Brain Cingulate Gyrus brain
47 chr17:43971200-43975000 Active TSS Pancreatic Islets Pancreatic Islet
48 chr17:43971200-43975200 Bivalent/Poised TSS HUES48 Cell Line embryonic stem cell
49 chr17:43971200-43975200 Bivalent/Poised TSS iPS-15b Cell Line embryonic stem cell
50 chr17:43971400-43972000 Active TSS H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived

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