Variant report

Variant rs62056782
Chromosome Location chr17:43974230-43974231
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:74 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:43971000-43974800 Active TSS Brain Dorsolateral Prefrontal Cortex brain
2 chr17:43971000-43974800 Active TSS Brain Substantia Nigra brain
3 chr17:43971000-43975400 Bivalent/Poised TSS iPS-18 Cell Line embryonic stem cell
4 chr17:43971200-43975000 Active TSS Brain Cingulate Gyrus brain
5 chr17:43971200-43975000 Active TSS Pancreatic Islets Pancreatic Islet
6 chr17:43971200-43975200 Bivalent/Poised TSS HUES48 Cell Line embryonic stem cell
7 chr17:43971200-43975200 Bivalent/Poised TSS iPS-15b Cell Line embryonic stem cell
8 chr17:43971400-43975200 Bivalent/Poised TSS ES-I3 Cell Line embryonic stem cell
9 chr17:43971400-43975400 Bivalent/Poised TSS H9 Cell Line embryonic stem cell
10 chr17:43971400-43975400 Bivalent/Poised TSS HUES64 Cell Line embryonic stem cell
11 chr17:43971400-43975400 Active TSS Brain Angular Gyrus brain
12 chr17:43971600-43975400 Bivalent/Poised TSS HUES6 Cell Line embryonic stem cell
13 chr17:43972600-43975200 Bivalent Enhancer H1 Derived Mesenchymal Stem Cells ES cell derived
14 chr17:43972800-43974800 Bivalent/Poised TSS Fetal Intestine Large intestine
15 chr17:43972800-43974800 Bivalent Enhancer Placenta Placenta
16 chr17:43972800-43977600 Enhancers Liver Liver
17 chr17:43973000-43975000 Bivalent Enhancer Spleen Spleen
18 chr17:43973200-43974800 Enhancers Pancreas Pancrea
19 chr17:43973200-43975000 Bivalent Enhancer Foreskin Keratinocyte Primary Cells skin03 Skin
20 chr17:43973200-43975200 Flanking Bivalent TSS/Enh Cortex derived primary cultured neurospheres brain
21 chr17:43973400-43974800 Bivalent Enhancer Primary T killer memory cells from peripheral blood blood
22 chr17:43973400-43974800 Bivalent Enhancer Foreskin Keratinocyte Primary Cells skin02 Skin
23 chr17:43973400-43975000 Bivalent Enhancer Primary Natural Killer cells fromperipheralblood blood
24 chr17:43973600-43974400 Bivalent/Poised TSS Colon Smooth Muscle Colon
25 chr17:43973600-43974600 Bivalent Enhancer Primary B cells from cord blood blood
26 chr17:43973600-43974600 Bivalent Enhancer Primary hematopoietic stem cells blood
27 chr17:43973600-43974800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
28 chr17:43973600-43974800 Bivalent Enhancer Foreskin Fibroblast Primary Cells skin02 Skin
29 chr17:43973600-43975000 Bivalent Enhancer Foreskin Melanocyte Primary Cells skin03 Skin
30 chr17:43973600-43975200 Bivalent Enhancer Primary hematopoietic stem cells G-CSF-mobilized Female --
31 chr17:43973600-43975400 Bivalent Enhancer Primary B cells from peripheral blood blood
32 chr17:43973600-43983400 Weak transcription Right Atrium heart
33 chr17:43973800-43974400 Bivalent Enhancer Breast Myoepithelial Primary Cells Breast
34 chr17:43973800-43974400 Enhancers Primary T killer naive cells fromperipheralblood blood
35 chr17:43973800-43974400 Bivalent/Poised TSS Ganglion Eminence derived primary cultured neurospheres brain
36 chr17:43973800-43974400 Bivalent Enhancer Foreskin Melanocyte Primary Cells skin01 Skin
37 chr17:43973800-43974800 Flanking Bivalent TSS/Enh Primary T cells effector/memory enriched fromperipheralblood blood
38 chr17:43973800-43975000 Enhancers Primary T helper naive cells from peripheral blood blood
39 chr17:43973800-43975000 Bivalent Enhancer Adipose Nuclei Adipose
40 chr17:43973800-43975000 Bivalent Enhancer Duodenum Smooth Muscle Duodenum
41 chr17:43973800-43975000 Bivalent Enhancer Esophagus oesophagus
42 chr17:43973800-43975000 Weak transcription Fetal Brain Male brain
43 chr17:43973800-43975200 Bivalent Enhancer H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
44 chr17:43973800-43975200 Bivalent Enhancer H9 Derived Neuron Cultured Cells ES cell derived
45 chr17:43973800-43975200 Bivalent Enhancer Left Ventricle heart
46 chr17:43973800-43975800 Bivalent Enhancer Primary T cells fromperipheralblood blood
47 chr17:43973800-43976200 Weak transcription Psoas Muscle Psoas
48 chr17:43974000-43974400 Bivalent Enhancer Primary T helper 17 cells PMA-I stimulated --
49 chr17:43974000-43974400 Bivalent Enhancer Fetal Muscle Leg muscle
50 chr17:43974000-43974400 Bivalent/Poised TSS Right Ventricle heart

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