Variant report

Variant rs62061734
Chromosome Location chr17:44018488-44018489
allele A/C/T
Outlinks Ensembl   UCSC
Chromatin state (count:38 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:44013200-44019600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
2 chr17:44016600-44020000 Enhancers Skeletal Muscle Male skeletal muscle
3 chr17:44016600-44020200 Enhancers Brain Substantia Nigra brain
4 chr17:44016600-44021600 Enhancers Brain Anterior Caudate brain
5 chr17:44016800-44019600 Enhancers Brain Angular Gyrus brain
6 chr17:44016800-44019800 Enhancers Skeletal Muscle Female skeletal muscle
7 chr17:44016800-44020200 Enhancers Brain Inferior Temporal Lobe brain
8 chr17:44016800-44021200 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
9 chr17:44016800-44021600 Enhancers Liver Liver
10 chr17:44017000-44020400 Enhancers Fetal Brain Male brain
11 chr17:44017000-44022600 Enhancers Brain Dorsolateral Prefrontal Cortex brain
12 chr17:44017200-44019600 Weak transcription H1 Cell Line embryonic stem cell
13 chr17:44017400-44019200 Weak transcription HUES6 Cell Line embryonic stem cell
14 chr17:44017400-44019400 Weak transcription iPS-15b Cell Line embryonic stem cell
15 chr17:44017400-44019400 Enhancers Psoas Muscle Psoas
16 chr17:44017400-44020000 Enhancers Brain Germinal Matrix brain
17 chr17:44017400-44021600 Enhancers Cortex derived primary cultured neurospheres brain
18 chr17:44017600-44018600 Enhancers Breast Myoepithelial Primary Cells Breast
19 chr17:44017600-44018600 Enhancers Right Ventricle heart
20 chr17:44017600-44018800 Enhancers Rectal Smooth Muscle rectum
21 chr17:44017600-44019000 Enhancers Left Ventricle heart
22 chr17:44017800-44019200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
23 chr17:44017800-44019600 Weak transcription H9 Cell Line embryonic stem cell
24 chr17:44017800-44020200 Enhancers Stomach Smooth Muscle stomach
25 chr17:44017800-44021600 Enhancers Adipose Nuclei Adipose
26 chr17:44018000-44019600 Enhancers Duodenum Smooth Muscle Duodenum
27 chr17:44018000-44019600 Weak transcription Esophagus oesophagus
28 chr17:44018000-44020200 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
29 chr17:44018000-44020400 Enhancers Colon Smooth Muscle Colon
30 chr17:44018200-44018600 Bivalent Enhancer Fetal Muscle Leg muscle
31 chr17:44018200-44020200 Weak transcription Right Atrium heart
32 chr17:44018200-44021400 Enhancers Brain Hippocampus Middle brain
33 chr17:44018400-44018600 Flanking Active TSS Brain Cingulate Gyrus brain
34 chr17:44018400-44018600 Bivalent Enhancer Fetal Lung lung
35 chr17:44018400-44018600 Enhancers Ovary ovary
36 chr17:44018400-44020000 Enhancers Lung lung
37 chr17:44018400-44021000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
38 chr17:44018400-44021200 Weak transcription Fetal Brain Female brain

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