Variant report

Variant rs62061820
Chromosome Location chr17:44185431-44185432
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:116 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:44144200-44206000 Weak transcription Esophagus oesophagus
2 chr17:44162000-44190200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
3 chr17:44164400-44193200 Weak transcription Fetal Stomach stomach
4 chr17:44168200-44193200 Weak transcription Fetal Brain Female brain
5 chr17:44172000-44199600 Weak transcription Placenta Placenta
6 chr17:44172200-44185600 Weak transcription Primary B cells from peripheral blood blood
7 chr17:44172200-44185600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
8 chr17:44172200-44193000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
9 chr17:44173200-44195800 Weak transcription Fetal Thymus thymus
10 chr17:44174800-44192200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
11 chr17:44174800-44192400 Enhancers Primary T helper naive cells fromperipheralblood blood
12 chr17:44175400-44199600 Enhancers Primary T helper cells PMA-I stimulated --
13 chr17:44178800-44186000 Weak transcription Fetal Intestine Large intestine
14 chr17:44178800-44187800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
15 chr17:44179000-44186000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
16 chr17:44179000-44186000 Weak transcription Primary neutrophils fromperipheralblood blood
17 chr17:44179000-44186400 Weak transcription Primary hematopoietic stem cells short term culture blood
18 chr17:44179000-44199200 Weak transcription Primary hematopoietic stem cells blood
19 chr17:44180000-44185600 Weak transcription Duodenum Mucosa Duodenum
20 chr17:44180200-44185600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
21 chr17:44180200-44187400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
22 chr17:44180200-44214400 Weak transcription Hela-S3 cervix
23 chr17:44180600-44201800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
24 chr17:44181000-44186400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
25 chr17:44181200-44186000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
26 chr17:44182000-44185800 Strong transcription GM12878-XiMat blood
27 chr17:44182200-44186800 Enhancers Primary T cells fromperipheralblood blood
28 chr17:44182200-44187600 Strong transcription Primary B cells from cord blood blood
29 chr17:44182600-44189200 Enhancers Stomach Smooth Muscle stomach
30 chr17:44182800-44186800 Enhancers Ovary ovary
31 chr17:44182800-44191400 Enhancers Primary T killer naive cells fromperipheralblood blood
32 chr17:44183000-44186400 Enhancers Fetal Adrenal Gland Adrenal Gland
33 chr17:44183200-44188800 Enhancers Brain Substantia Nigra brain
34 chr17:44183200-44190600 Weak transcription Fetal Intestine Small intestine
35 chr17:44183400-44187200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
36 chr17:44183400-44193600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
37 chr17:44183400-44198400 Weak transcription Thymus Thymus
38 chr17:44183600-44188600 Enhancers Brain Hippocampus Middle brain
39 chr17:44183800-44189400 Enhancers Fetal Heart heart
40 chr17:44184000-44186200 Enhancers Rectal Smooth Muscle rectum
41 chr17:44184000-44188800 Enhancers Duodenum Smooth Muscle Duodenum
42 chr17:44184000-44188800 Enhancers Right Ventricle heart
43 chr17:44184000-44190000 Enhancers Primary T helper 17 cells PMA-I stimulated --
44 chr17:44184200-44185600 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
45 chr17:44184200-44185600 Flanking Active TSS iPS-20b Cell Line embryonic stem cell
46 chr17:44184200-44185600 Enhancers HUVEC blood vessel
47 chr17:44184200-44185800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
48 chr17:44184200-44185800 Enhancers A549 lung
49 chr17:44184200-44186400 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
50 chr17:44184200-44186400 Enhancers iPS-15b Cell Line embryonic stem cell

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