Variant report

Variant rs62062770
Chromosome Location chr17:44019680-44019681
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:48 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:44016600-44020000 Enhancers Skeletal Muscle Male skeletal muscle
2 chr17:44016600-44020200 Enhancers Brain Substantia Nigra brain
3 chr17:44016600-44021600 Enhancers Brain Anterior Caudate brain
4 chr17:44016800-44019800 Enhancers Skeletal Muscle Female skeletal muscle
5 chr17:44016800-44020200 Enhancers Brain Inferior Temporal Lobe brain
6 chr17:44016800-44021200 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
7 chr17:44016800-44021600 Enhancers Liver Liver
8 chr17:44017000-44020400 Enhancers Fetal Brain Male brain
9 chr17:44017000-44022600 Enhancers Brain Dorsolateral Prefrontal Cortex brain
10 chr17:44017400-44020000 Enhancers Brain Germinal Matrix brain
11 chr17:44017400-44021600 Enhancers Cortex derived primary cultured neurospheres brain
12 chr17:44017800-44020200 Enhancers Stomach Smooth Muscle stomach
13 chr17:44017800-44021600 Enhancers Adipose Nuclei Adipose
14 chr17:44018000-44020200 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
15 chr17:44018000-44020400 Enhancers Colon Smooth Muscle Colon
16 chr17:44018200-44020200 Weak transcription Right Atrium heart
17 chr17:44018200-44021400 Enhancers Brain Hippocampus Middle brain
18 chr17:44018400-44020000 Enhancers Lung lung
19 chr17:44018400-44021000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
20 chr17:44018400-44021200 Weak transcription Fetal Brain Female brain
21 chr17:44018600-44021600 Enhancers Brain Cingulate Gyrus brain
22 chr17:44018600-44026000 Weak transcription Breast Myoepithelial Primary Cells Breast
23 chr17:44018800-44025800 Weak transcription Rectal Smooth Muscle rectum
24 chr17:44019000-44020200 Weak transcription Left Ventricle heart
25 chr17:44019200-44019800 Bivalent Enhancer ES-I3 Cell Line embryonic stem cell
26 chr17:44019200-44020000 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
27 chr17:44019200-44020400 Bivalent Enhancer Fetal Muscle Leg muscle
28 chr17:44019200-44021200 Enhancers HUES6 Cell Line embryonic stem cell
29 chr17:44019400-44020800 Enhancers iPS-15b Cell Line embryonic stem cell
30 chr17:44019400-44021000 Enhancers HUES48 Cell Line embryonic stem cell
31 chr17:44019400-44021200 Weak transcription Psoas Muscle Psoas
32 chr17:44019600-44019800 Bivalent Enhancer H1 Derived Mesenchymal Stem Cells ES cell derived
33 chr17:44019600-44019800 Flanking Bivalent TSS/Enh iPS-20b Cell Line embryonic stem cell
34 chr17:44019600-44020000 Flanking Active TSS ES-WA7 Cell Line embryonic stem cell
35 chr17:44019600-44020000 Weak transcription Brain Angular Gyrus brain
36 chr17:44019600-44020000 Enhancers Esophagus oesophagus
37 chr17:44019600-44020000 Enhancers Ovary ovary
38 chr17:44019600-44020400 Enhancers H9 Cell Line embryonic stem cell
39 chr17:44019600-44020400 Enhancers HUES64 Cell Line embryonic stem cell
40 chr17:44019600-44020400 Enhancers iPS-18 Cell Line embryonic stem cell
41 chr17:44019600-44020400 Bivalent Enhancer Foreskin Fibroblast Primary Cells skin01 Skin
42 chr17:44019600-44020400 Bivalent Enhancer Fetal Muscle Trunk muscle
43 chr17:44019600-44020400 Enhancers Right Ventricle heart
44 chr17:44019600-44020600 Enhancers ES-UCSF4 Cell Line embryonic stem cell
45 chr17:44019600-44020800 Enhancers H1 Cell Line embryonic stem cell
46 chr17:44019600-44020800 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
47 chr17:44019600-44022000 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
48 chr17:44019600-44022000 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin

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