Variant report

Variant rs62062772
Chromosome Location chr17:44020314-44020315
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:44 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:44016600-44021600 Enhancers Brain Anterior Caudate brain
2 chr17:44016800-44021200 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
3 chr17:44016800-44021600 Enhancers Liver Liver
4 chr17:44017000-44020400 Enhancers Fetal Brain Male brain
5 chr17:44017000-44022600 Enhancers Brain Dorsolateral Prefrontal Cortex brain
6 chr17:44017400-44021600 Enhancers Cortex derived primary cultured neurospheres brain
7 chr17:44017800-44021600 Enhancers Adipose Nuclei Adipose
8 chr17:44018000-44020400 Enhancers Colon Smooth Muscle Colon
9 chr17:44018200-44021400 Enhancers Brain Hippocampus Middle brain
10 chr17:44018400-44021000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
11 chr17:44018400-44021200 Weak transcription Fetal Brain Female brain
12 chr17:44018600-44021600 Enhancers Brain Cingulate Gyrus brain
13 chr17:44018600-44026000 Weak transcription Breast Myoepithelial Primary Cells Breast
14 chr17:44018800-44025800 Weak transcription Rectal Smooth Muscle rectum
15 chr17:44019200-44020400 Bivalent Enhancer Fetal Muscle Leg muscle
16 chr17:44019200-44021200 Enhancers HUES6 Cell Line embryonic stem cell
17 chr17:44019400-44020800 Enhancers iPS-15b Cell Line embryonic stem cell
18 chr17:44019400-44021000 Enhancers HUES48 Cell Line embryonic stem cell
19 chr17:44019400-44021200 Weak transcription Psoas Muscle Psoas
20 chr17:44019600-44020400 Enhancers H9 Cell Line embryonic stem cell
21 chr17:44019600-44020400 Enhancers HUES64 Cell Line embryonic stem cell
22 chr17:44019600-44020400 Enhancers iPS-18 Cell Line embryonic stem cell
23 chr17:44019600-44020400 Bivalent Enhancer Foreskin Fibroblast Primary Cells skin01 Skin
24 chr17:44019600-44020400 Bivalent Enhancer Fetal Muscle Trunk muscle
25 chr17:44019600-44020400 Enhancers Right Ventricle heart
26 chr17:44019600-44020600 Enhancers ES-UCSF4 Cell Line embryonic stem cell
27 chr17:44019600-44020800 Enhancers H1 Cell Line embryonic stem cell
28 chr17:44019600-44020800 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
29 chr17:44019600-44022000 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
30 chr17:44019600-44022000 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
31 chr17:44019800-44021400 Enhancers ES-I3 Cell Line embryonic stem cell
32 chr17:44020000-44020400 Flanking Active TSS Skeletal Muscle Male skeletal muscle
33 chr17:44020000-44021400 Genic enhancers Brain Germinal Matrix brain
34 chr17:44020000-44026000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
35 chr17:44020000-44031400 Enhancers Brain Angular Gyrus brain
36 chr17:44020200-44020400 Bivalent Enhancer Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
37 chr17:44020200-44020400 Flanking Active TSS Skeletal Muscle Female skeletal muscle
38 chr17:44020200-44021000 Flanking Active TSS Brain Inferior Temporal Lobe brain
39 chr17:44020200-44021200 Flanking Active TSS Brain Substantia Nigra brain
40 chr17:44020200-44021200 Enhancers Right Atrium heart
41 chr17:44020200-44021600 Weak transcription Gastric stomach
42 chr17:44020200-44022000 Enhancers Left Ventricle heart
43 chr17:44020200-44024400 Weak transcription iPS-20b Cell Line embryonic stem cell
44 chr17:44020200-44025800 Weak transcription Stomach Smooth Muscle stomach

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