Variant report

Variant rs62062785
Chromosome Location chr17:44024562-44024563
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:32 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:44018600-44026000 Weak transcription Breast Myoepithelial Primary Cells Breast
2 chr17:44018800-44025800 Weak transcription Rectal Smooth Muscle rectum
3 chr17:44020000-44026000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
4 chr17:44020000-44031400 Enhancers Brain Angular Gyrus brain
5 chr17:44020200-44025800 Weak transcription Stomach Smooth Muscle stomach
6 chr17:44020400-44025800 Weak transcription Colon Smooth Muscle Colon
7 chr17:44020400-44025800 Weak transcription Fetal Brain Male brain
8 chr17:44020400-44026000 Weak transcription H9 Cell Line embryonic stem cell
9 chr17:44020800-44026000 Weak transcription H1 Cell Line embryonic stem cell
10 chr17:44021200-44024800 Enhancers Brain Substantia Nigra brain
11 chr17:44021200-44026200 Weak transcription Right Atrium heart
12 chr17:44021800-44024600 Weak transcription Gastric stomach
13 chr17:44022000-44024600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
14 chr17:44022000-44025800 Weak transcription Left Ventricle heart
15 chr17:44022400-44024800 Enhancers Brain Inferior Temporal Lobe brain
16 chr17:44022400-44025000 Enhancers Brain Cingulate Gyrus brain
17 chr17:44022400-44026000 Enhancers Brain Hippocampus Middle brain
18 chr17:44022600-44026000 Weak transcription Brain Germinal Matrix brain
19 chr17:44022600-44026200 Enhancers Brain Anterior Caudate brain
20 chr17:44022600-44037200 Weak transcription Fetal Brain Female brain
21 chr17:44024000-44024800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
22 chr17:44024000-44024800 Enhancers Cortex derived primary cultured neurospheres brain
23 chr17:44024000-44024800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
24 chr17:44024200-44025000 Enhancers Adipose Nuclei Adipose
25 chr17:44024200-44025000 Enhancers Brain Dorsolateral Prefrontal Cortex brain
26 chr17:44024200-44025000 Enhancers Skeletal Muscle Female skeletal muscle
27 chr17:44024200-44025800 Enhancers Skeletal Muscle Male skeletal muscle
28 chr17:44024200-44026000 Enhancers Liver Liver
29 chr17:44024400-44024600 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
30 chr17:44024400-44024600 Enhancers Right Ventricle heart
31 chr17:44024400-44024800 Enhancers Psoas Muscle Psoas
32 chr17:44024400-44025600 Weak transcription Hela-S3 cervix

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