Variant report

Variant rs62062799
Chromosome Location chr17:44027521-44027522
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:27 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:44020000-44031400 Enhancers Brain Angular Gyrus brain
2 chr17:44022600-44037200 Weak transcription Fetal Brain Female brain
3 chr17:44024800-44050800 Weak transcription Gastric stomach
4 chr17:44025600-44029800 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
5 chr17:44026000-44028000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
6 chr17:44026200-44027800 Enhancers ES-UCSF4 Cell Line embryonic stem cell
7 chr17:44026600-44027800 Enhancers Psoas Muscle Psoas
8 chr17:44026800-44027600 Enhancers Spleen Spleen
9 chr17:44026800-44027800 Enhancers Skeletal Muscle Female skeletal muscle
10 chr17:44026800-44028400 Weak transcription Fetal Brain Male brain
11 chr17:44026800-44029400 Enhancers Brain Inferior Temporal Lobe brain
12 chr17:44027000-44027600 Bivalent Enhancer Stomach Smooth Muscle stomach
13 chr17:44027000-44027800 Bivalent Enhancer Primary hematopoietic stem cells short term culture blood
14 chr17:44027000-44027800 Enhancers Skeletal Muscle Male skeletal muscle
15 chr17:44027000-44028000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
16 chr17:44027000-44029600 Enhancers Brain Dorsolateral Prefrontal Cortex brain
17 chr17:44027000-44030600 Weak transcription Liver Liver
18 chr17:44027000-44031800 Enhancers Brain Substantia Nigra brain
19 chr17:44027000-44032400 Weak transcription Cortex derived primary cultured neurospheres brain
20 chr17:44027000-44033600 Enhancers Brain Anterior Caudate brain
21 chr17:44027200-44027600 Bivalent Enhancer iPS DF 19.11 Cell Line embryonic stem cell
22 chr17:44027200-44027800 Weak transcription Adipose Nuclei Adipose
23 chr17:44027200-44028400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
24 chr17:44027200-44028400 Weak transcription A549 lung
25 chr17:44027200-44029800 Enhancers Brain Hippocampus Middle brain
26 chr17:44027200-44031400 Enhancers Brain Cingulate Gyrus brain
27 chr17:44027400-44027600 Bivalent Enhancer Placenta Placenta

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