Variant report

Variant rs62064603
Chromosome Location chr17:43484496-43484497
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:95 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:43471600-43484600 Strong transcription Primary T cells from cord blood blood
2 chr17:43472600-43485600 Weak transcription HSMMtube muscle
3 chr17:43472800-43487400 Weak transcription HUVEC blood vessel
4 chr17:43475800-43490400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
5 chr17:43479400-43489600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
6 chr17:43481600-43485400 Genic enhancers Primary T cells fromperipheralblood blood
7 chr17:43482200-43486400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
8 chr17:43482200-43486800 Weak transcription Liver Liver
9 chr17:43482200-43487200 Weak transcription Brain Inferior Temporal Lobe brain
10 chr17:43482400-43485400 Weak transcription Small Intestine intestine
11 chr17:43482400-43485600 Weak transcription Brain Angular Gyrus brain
12 chr17:43482400-43486400 Weak transcription Brain Anterior Caudate brain
13 chr17:43482400-43486600 Weak transcription Brain Cingulate Gyrus brain
14 chr17:43482400-43486600 Weak transcription NHEK skin
15 chr17:43482400-43487000 Weak transcription Pancreas Pancrea
16 chr17:43482400-43501600 Weak transcription HMEC breast
17 chr17:43482600-43486600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
18 chr17:43482800-43486200 Weak transcription K562 blood
19 chr17:43483000-43484600 Genic enhancers Left Ventricle heart
20 chr17:43483000-43484800 Genic enhancers Primary monocytes fromperipheralblood blood
21 chr17:43483200-43484800 Enhancers Right Atrium heart
22 chr17:43483200-43485400 Genic enhancers Primary T regulatory cells fromperipheralblood blood
23 chr17:43483200-43485400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
24 chr17:43483200-43485600 Enhancers Primary hematopoietic stem cells blood
25 chr17:43483200-43485600 Weak transcription Placenta Amnion Placenta Amnion
26 chr17:43483200-43496000 Weak transcription Hela-S3 cervix
27 chr17:43483400-43484600 Enhancers Placenta Placenta
28 chr17:43483400-43484800 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
29 chr17:43483400-43485200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
30 chr17:43483400-43485400 Enhancers Sigmoid Colon Sigmoid Colon
31 chr17:43483400-43485600 Genic enhancers Primary T helper cells fromperipheralblood blood
32 chr17:43483400-43485600 Weak transcription Right Ventricle heart
33 chr17:43483400-43485800 Weak transcription Esophagus oesophagus
34 chr17:43483400-43486200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
35 chr17:43483400-43486600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
36 chr17:43483400-43487000 Weak transcription Colon Smooth Muscle Colon
37 chr17:43483400-43487200 Enhancers Stomach Mucosa stomach
38 chr17:43483400-43488800 Weak transcription Psoas Muscle Psoas
39 chr17:43483600-43484600 Enhancers H1 Cell Line embryonic stem cell
40 chr17:43483600-43484600 Enhancers HUES6 Cell Line embryonic stem cell
41 chr17:43483600-43484600 Genic enhancers Primary mononuclear cells fromperipheralblood Blood
42 chr17:43483600-43484600 Enhancers Fetal Adrenal Gland Adrenal Gland
43 chr17:43483600-43485400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
44 chr17:43483600-43485600 Weak transcription Duodenum Smooth Muscle Duodenum
45 chr17:43483600-43485600 Genic enhancers Fetal Thymus thymus
46 chr17:43483600-43485800 Weak transcription Brain Substantia Nigra brain
47 chr17:43483800-43484600 Enhancers Breast Myoepithelial Primary Cells Breast
48 chr17:43483800-43484800 Enhancers ES-I3 Cell Line embryonic stem cell
49 chr17:43483800-43484800 Flanking Active TSS Rectal Mucosa Donor 29 rectum
50 chr17:43483800-43485000 Weak transcription HUES48 Cell Line embryonic stem cell

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