Variant report

Variant	rs62064653
Chromosome Location	chr17:43509316-43509317
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chr17:43508995-43509338	Gliobla	brain:	n/a	n/a
2	POLR2A	chr17:43509050-43509335	A549	lung:	n/a	n/a
3	POLR2A	chr17:43508778-43509376	HepG2	liver:	n/a	n/a
4	POLR2A	chr17:43508103-43509362	GM12892	blood:	n/a	n/a
5	POLR2A	chr17:43508552-43509337	GM12891	blood:	n/a	n/a
6	POLR2A	chr17:43508176-43509475	GM18951	blood:	n/a	n/a
7	POLR2A	chr17:43508808-43510604	PFSK-1	brain:	n/a	n/a
8	BCL3	chr17:43508827-43509340	A549	lung:	n/a	n/a
9	MAX	chr17:43507960-43509667	ECC-1	luminal epithelium:	n/a	n/a
10	MAX	chr17:43508075-43509532	MCF-7	breast:	n/a	n/a
11	EGR1	chr17:43509174-43509449	K562	blood:	n/a	n/a
12	POLR2A	chr17:43508846-43509360	GM12892	blood:	n/a	n/a
13	MAX	chr17:43509092-43509321	Hela-S3	cervix:	n/a	n/a
14	POLR2A	chr17:43509049-43509347	Hela-S3	cervix:	n/a	n/a
15	MAX	chr17:43508060-43509374	ECC-1	luminal epithelium:	n/a	n/a
16	POLR2A	chr17:43508886-43510525	HUVEC	blood vessel:	n/a	n/a
17	POLR2A	chr17:43508138-43509344	GM18505	blood:	n/a	n/a
18	SIN3A	chr17:43507914-43509808	H1-hESC	embryonic stem cell:	n/a	n/a
19	POLR2A	chr17:43509108-43509635	MCF10A-Er-Src	breast:	n/a	n/a
20	ZBTB7A	chr17:43508508-43509337	K562	blood:	n/a	chr17:43508799-43508807 chr17:43508951-43508960
21	POLR2A	chr17:43508888-43509358	K562	blood:	n/a	n/a
22	MYC	chr17:43509014-43509358	MCF-7	breast:	n/a	n/a
23	NR2F2	chr17:43508043-43509586	MCF-7	breast:	n/a	n/a
24	TCF12	chr17:43507914-43509354	ECC-1	luminal epithelium:	n/a	chr17:43508456-43508466
25	POLR2A	chr17:43508944-43509341	GM12892	blood:	n/a	n/a
26	MAX	chr17:43508802-43509524	A549	lung:	n/a	n/a
27	POLR2A	chr17:43509038-43509335	Hela-S3	cervix:	n/a	n/a
28	POLR2A	chr17:43508600-43509340	GM12878	blood:	n/a	n/a
29	MAZ	chr17:43508134-43509349	GM12878	blood:	n/a	n/a
30	YY1	chr17:43509165-43509559	HCT-116	colon:	n/a	n/a
31	POLR2A	chr17:43508502-43509644	ECC-1	luminal epithelium:	n/a	n/a
32	POLR2A	chr17:43508169-43509434	GM15510	blood:	n/a	n/a
33	POLR2A	chr17:43508560-43510553	MCF-7	breast:	n/a	n/a
34	SIN3AK20	chr17:43507950-43509626	MCF-7	breast:	n/a	n/a
35	POLR2A	chr17:43508912-43509326	PFSK-1	brain:	n/a	n/a
36	SP1	chr17:43508765-43509423	A549	lung:	n/a	chr17:43508889-43508898 chr17:43508954-43508966 chr17:43508956-43508965 chr17:43508888-43508900 chr17:43509070-43509079 chr17:43508954-43508966 chr17:43508889-43508899 chr17:43509022-43509033 chr17:43509070-43509079 chr17:43509022-43509034 chr17:43509022-43509034 chr17:43509069-43509078 chr17:43508890-43508899
37	POLR2A	chr17:43508941-43509331	A549	lung:	n/a	n/a
38	POLR2A	chr17:43508693-43509675	HCT-116	colon:	n/a	n/a
39	POLR2A	chr17:43508998-43509344	HUVEC	blood vessel:	n/a	n/a
40	MAZ	chr17:43509007-43509471	Hela-S3	cervix:	n/a	n/a
41	MAX	chr17:43508555-43509665	A549	lung:	n/a	n/a
42	POLR2A	chr17:43508775-43510399	MCF-7	breast:	n/a	n/a
43	POLR2A	chr17:43508804-43509672	HEK293	kidney:	n/a	n/a
44	ELF1	chr17:43508341-43509344	GM12878	blood:	n/a	chr17:43508674-43508687 chr17:43508720-43508733 chr17:43509027-43509039 chr17:43508886-43508895 chr17:43508676-43508687
45	EP300	chr17:43508882-43509341	T-47D	breast:	n/a	chr17:43508950-43508959
46	MAX	chr17:43508543-43509327	GM12878	blood:	n/a	n/a
47	POLR2A	chr17:43508703-43510485	MCF-7	breast:	n/a	n/a
48	SP1	chr17:43508739-43509359	H1-hESC	embryonic stem cell:	n/a	chr17:43508889-43508898 chr17:43508954-43508966 chr17:43508956-43508965 chr17:43508888-43508900 chr17:43509070-43509079 chr17:43508954-43508966 chr17:43508889-43508899 chr17:43509022-43509033 chr17:43509070-43509079 chr17:43509022-43509034 chr17:43509022-43509034 chr17:43509069-43509078 chr17:43508890-43508899
49	POLR2A	chr17:43508941-43509432	A549	lung:	n/a	n/a
50	FOXA1	chr17:43508757-43509565	T-47D	breast:	n/a	n/a

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr17:43509267-43509317	NT2-D1	testis:	n/a
2	chr17:43509267-43509317	AG04450	lung:	fetal
3	chr17:43509267-43509317	PFSK-1	brain:	n/a
4	chr17:43509267-43509317	SK-N-SH_RA	brain:	n/a
5	chr17:43509267-43509317	NH-A	brain:	n/a
6	chr17:43509267-43509317	NHDF-neo	bronchial:	n/a
7	chr17:43509267-43509317	HMEC	breast:	n/a
8	chr17:43509267-43509317	BE2_C	brain:	n/a
9	chr17:43509267-43509317	AoSMC	blood vessel:	n/a
10	chr17:43509267-43509317	GM12891	blood:	n/a
11	chr17:43509267-43509317	HEK293	kidney:	embryo
12	chr17:43509267-43509317	HCPEpiC	choroid plexus:	n/a
13	chr17:43509267-43509317	NB4	blood:	n/a
14	chr17:43509267-43509317	AG09309	skin:	n/a
15	chr17:43509267-43509317	SAEC	small airway:	n/a
16	chr17:43509267-43509317	PANC-1	pancreas:	n/a
17	chr17:43509267-43509317	A549	lung:	n/a
18	chr17:43509267-43509317	HPAEpiC	pulmonary alveolar:	n/a
19	chr17:43509267-43509317	GM12892	blood:	n/a
20	chr17:43509267-43509317	NHBE	bronchial:	n/a
21	chr17:43509267-43509317	BJ	skin:	n/a
22	chr17:43509267-43509317	U87	brain:	n/a
23	chr17:43509267-43509317	HEEpiC	esophagus:	n/a
24	chr17:43509267-43509317	SK-N-MC	brain:	n/a
25	chr17:43509267-43509317	AG09319	gingival:	n/a
26	chr17:43509267-43509317	HRPEpiC	eye:	n/a
27	chr17:43509267-43509317	HRCEpiC	kidney:	n/a
28	chr17:43509267-43509317	HL-60	blood:	n/a
29	chr17:43509267-43509317	RPTEC	kidney:	n/a
30	chr17:43509267-43509317	CMK	blood:	n/a
31	chr17:43509267-43509317	LNCaP	prostate:	n/a
32	chr17:43509267-43509317	HIPEpiC	eye:	n/a
33	chr17:43509267-43509317	Caco-2	colon:	n/a
34	chr17:43509267-43509317	ProgFib	skin:	n/a
35	chr17:43509267-43509317	Hela-S3	cervix:	n/a
36	chr17:43509267-43509317	K562	blood:	n/a
37	chr17:43509267-43509317	AG04449	skin:	fetal
38	chr17:43509267-43509317	SK-N-SH	brain:	n/a
39	chr17:43509267-43509317	HNPCEpiC	eye:	n/a
40	chr17:43509267-43509317	GM06990	blood:	n/a
41	chr17:43509267-43509317	Hepatocyte	liver:	n/a
42	chr17:43509267-43509317	SKMC	muscle:	n/a
43	chr17:43509267-43509317	ovcar-3	ovarian:	n/a
44	chr17:43509267-43509317	HRE	kidney:	n/a
45	chr17:43509267-43509317	IMR90	lung:	fetal
46	chr17:43509267-43509317	HAEpiC	amniotic membrane:	n/a
47	chr17:43509267-43509317	GM19239	blood:	n/a
48	chr17:43509267-43509317	MCF10A-Er-Src	breast:	n/a
49	chr17:43509267-43509317	GM12878	blood:	n/a
50	chr17:43509267-43509317	MCF-7	breast:	n/a

No.	Distal block	Cell Line	Cell type
1	chr17:43491389..43493065-chr17:43507690..43509408,2	MCF-7	breast:
2	chr17:43501401..43503182-chr17:43508338..43510884,3	MCF-7	breast:
3	chr17:43506157..43512040-chr17:43512446..43519071,9	MCF-7	breast:
4	chr17:43209603..43212111-chr17:43507781..43510715,2	MCF-7	breast:
5	chr17:43392748..43395786-chr17:43508112..43511111,3	MCF-7	breast:
6	chr17:43501715..43503974-chr17:43507657..43510348,3	MCF-7	breast:
7	chr17:43507001..43509385-chr17:43510815..43513693,2	K562	blood:
8	chr17:43508394..43510622-chr17:43970082..43971846,2	MCF-7	breast:
9	chr17:43507648..43509676-chr17:43511432..43515176,4	K562	blood:

Variant related genes	Relation type
ARHGAP27	TF binding region
ARHGAP27	CpG island
ENSG00000181513	Chromatin interaction
ENSG00000225190	Chromatin interaction
ENSG00000161714	Chromatin interaction
ENSG00000186868	Chromatin interaction
ENSG00000006062	Chromatin interaction
ENSG00000159314	Chromatin interaction

Extended variants
information (count: 409 )
Associated
traits (count: 6 )

rSNPs within LD-proxies of this variant (count:359)

rs_ID	r²[population]
rs11012	0.88[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1105569	1.00[ASN][1000 genomes]
rs1105570	1.00[ASN][1000 genomes]
rs1105571	1.00[ASN][1000 genomes]
rs12452273	0.88[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12939187	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12940792	0.90[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12942666	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12942951	0.86[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12946723	0.80[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs12946900	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12947718	0.95[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12949256	0.80[EUR][1000 genomes]
rs12950965	0.87[AFR][1000 genomes];0.82[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12952504	0.88[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs12952764	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1568949	1.00[ASN][1000 genomes]
rs1568950	1.00[ASN][1000 genomes]
rs1568951	1.00[ASN][1000 genomes]
rs16940633	1.00[ASN][1000 genomes]
rs1706748	1.00[ASN][1000 genomes]
rs17631303	0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17631676	0.87[AFR][1000 genomes];0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17686610	1.00[ASN][1000 genomes]
rs17687462	1.00[ASN][1000 genomes]
rs17687504	1.00[ASN][1000 genomes]
rs17687534	1.00[ASN][1000 genomes]
rs17687571	1.00[ASN][1000 genomes]
rs17687625	1.00[ASN][1000 genomes]
rs17687667	1.00[ASN][1000 genomes]
rs17687740	1.00[ASN][1000 genomes]
rs17687838	1.00[ASN][1000 genomes]
rs17687849	1.00[ASN][1000 genomes]
rs17688002	1.00[ASN][1000 genomes]
rs17688032	1.00[ASN][1000 genomes]
rs17688056	1.00[ASN][1000 genomes]
rs17688068	1.00[ASN][1000 genomes]
rs17688090	1.00[ASN][1000 genomes]
rs17688126	1.00[ASN][1000 genomes]
rs17688205	1.00[ASN][1000 genomes]
rs17688249	1.00[ASN][1000 genomes]
rs17688296	1.00[ASN][1000 genomes]
rs17688767	1.00[ASN][1000 genomes]
rs17688773	1.00[ASN][1000 genomes]
rs17688875	1.00[ASN][1000 genomes]
rs17688916	1.00[ASN][1000 genomes]
rs17688922	1.00[ASN][1000 genomes]
rs17688944	1.00[ASN][1000 genomes]
rs17689104	1.00[ASN][1000 genomes]
rs17689116	1.00[ASN][1000 genomes]
rs17689182	1.00[ASN][1000 genomes]
rs17689218	1.00[ASN][1000 genomes]
rs17760577	1.00[ASN][1000 genomes]
rs17760631	1.00[ASN][1000 genomes]
rs17760733	1.00[ASN][1000 genomes]
rs17760817	1.00[ASN][1000 genomes]
rs17761046	1.00[ASN][1000 genomes]
rs17761100	1.00[ASN][1000 genomes]
rs17761124	1.00[ASN][1000 genomes]
rs17761207	1.00[ASN][1000 genomes]
rs17761387	1.00[ASN][1000 genomes]
rs17761581	1.00[ASN][1000 genomes]
rs17762073	1.00[ASN][1000 genomes]
rs17762165	1.00[ASN][1000 genomes]
rs17762308	1.00[ASN][1000 genomes]
rs17762361	1.00[ASN][1000 genomes]
rs17762535	1.00[ASN][1000 genomes]
rs1808189	0.84[EUR][1000 genomes]
rs1879581	0.87[AFR][1000 genomes];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1879582	1.00[ASN][1000 genomes]
rs1879585	0.82[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1879586	1.00[ASN][1000 genomes]
rs1880749	1.00[ASN][1000 genomes]
rs1880750	1.00[ASN][1000 genomes]
rs1880752	1.00[ASN][1000 genomes]
rs1971374	1.00[ASN][1000 genomes]
rs2028078	0.86[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2077606	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2090847	0.82[AFR][1000 genomes];0.86[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2139890	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2253488	1.00[ASN][1000 genomes]
rs241020	1.00[ASN][1000 genomes]
rs241021	1.00[ASN][1000 genomes]
rs241028	1.00[ASN][1000 genomes]
rs241032	1.00[ASN][1000 genomes]
rs241033	1.00[ASN][1000 genomes]
rs241041	1.00[ASN][1000 genomes]
rs2458179	1.00[ASN][1000 genomes]
rs2458187	1.00[ASN][1000 genomes]
rs2462835	1.00[ASN][1000 genomes]
rs2463523	1.00[ASN][1000 genomes]
rs2668644	1.00[ASN][1000 genomes]
rs2684526	1.00[ASN][1000 genomes]
rs2693359	1.00[ASN][1000 genomes]
rs2693362	1.00[ASN][1000 genomes]
rs2942164	1.00[ASN][1000 genomes]
rs2942165	1.00[ASN][1000 genomes]
rs2942166	1.00[ASN][1000 genomes]
rs2942167	1.00[ASN][1000 genomes]
rs2942168	1.00[ASN][1000 genomes]
rs2942169	1.00[ASN][1000 genomes]
rs2942170	1.00[ASN][1000 genomes]
rs2959992	1.00[ASN][1000 genomes]
rs2960000	0.83[AMR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3108317	1.00[ASN][1000 genomes]
rs34018943	0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34063617	0.87[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34104358	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3418	1.00[ASN][1000 genomes]
rs34286926	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34363898	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34465449	0.88[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34792542	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34887474	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34915103	0.90[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35327136	0.88[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35389313	0.91[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35489312	0.82[AFR][1000 genomes];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35519908	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35626715	0.90[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs35884427	0.90[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs36078910	0.91[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs36114997	0.82[AFR][1000 genomes];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs365825	1.00[ASN][1000 genomes]
rs383241	1.00[ASN][1000 genomes]
rs385691	1.00[ASN][1000 genomes]
rs389217	1.00[ASN][1000 genomes]
rs389978	1.00[ASN][1000 genomes]
rs392116	1.00[ASN][1000 genomes]
rs393152	1.00[ASN][1000 genomes]
rs393675	1.00[ASN][1000 genomes]
rs393838	1.00[ASN][1000 genomes]
rs3946526	0.93[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs396593	1.00[ASN][1000 genomes]
rs3972613	1.00[ASN][1000 genomes]
rs413778	1.00[ASN][1000 genomes]
rs413917	1.00[ASN][1000 genomes]
rs422112	1.00[ASN][1000 genomes]
rs424243	1.00[ASN][1000 genomes]
rs434428	1.00[ASN][1000 genomes]
rs434598	1.00[ASN][1000 genomes]
rs434805	1.00[ASN][1000 genomes]
rs434971	1.00[ASN][1000 genomes]
rs439558	1.00[ASN][1000 genomes]
rs4401083	1.00[ASN][1000 genomes]
rs4479288	1.00[ASN][1000 genomes]
rs4479289	1.00[ASN][1000 genomes]
rs448830	1.00[ASN][1000 genomes]
rs4605208	1.00[ASN][1000 genomes]
rs4609898	1.00[ASN][1000 genomes]
rs4617909	1.00[ASN][1000 genomes]
rs4763	0.88[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs5026246	1.00[ASN][1000 genomes]
rs55642947	0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55643511	0.88[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55648326	0.84[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55651627	1.00[ASN][1000 genomes]
rs55652155	0.87[AFR][1000 genomes];0.88[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55653963	1.00[ASN][1000 genomes]
rs55663797	0.87[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55669046	1.00[ASN][1000 genomes]
rs55671319	0.86[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55688739	1.00[ASN][1000 genomes]
rs55703888	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55746869	0.84[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55787734	1.00[ASN][1000 genomes]
rs55790407	0.92[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55793500	0.80[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55849973	1.00[ASN][1000 genomes]
rs55896111	1.00[ASN][1000 genomes]
rs55914643	0.86[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55925547	0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55962674	1.00[ASN][1000 genomes]
rs55972157	1.00[ASN][1000 genomes]
rs55973918	1.00[ASN][1000 genomes]
rs55974014	1.00[ASN][1000 genomes]
rs55980621	1.00[ASN][1000 genomes]
rs55989971	1.00[ASN][1000 genomes]
rs56005713	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56015792	0.87[AFR][1000 genomes];0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56020833	0.95[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs56046792	1.00[ASN][1000 genomes]
rs56062621	1.00[ASN][1000 genomes]
rs56100013	1.00[ASN][1000 genomes]
rs56110538	1.00[ASN][1000 genomes]
rs56159231	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56160448	1.00[ASN][1000 genomes]
rs56167344	1.00[ASN][1000 genomes]
rs56167560	1.00[ASN][1000 genomes]
rs56168933	0.96[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56192752	0.87[AFR][1000 genomes];0.88[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56205560	1.00[ASN][1000 genomes]
rs56212100	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56220242	1.00[ASN][1000 genomes]
rs56220387	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56236914	0.85[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56323722	1.00[ASN][1000 genomes]
rs56323832	1.00[ASN][1000 genomes]
rs56328224	1.00[ASN][1000 genomes]
rs56378631	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56380663	1.00[ASN][1000 genomes]
rs56397077	1.00[ASN][1000 genomes]
rs56400821	1.00[ASN][1000 genomes]
rs56406407	1.00[ASN][1000 genomes]
rs593720	1.00[ASN][1000 genomes]
rs61667602	1.00[ASN][1000 genomes]
rs62053939	1.00[ASN][1000 genomes]
rs62053940	1.00[ASN][1000 genomes]
rs62053943	1.00[ASN][1000 genomes]
rs62053945	1.00[ASN][1000 genomes]
rs62053946	1.00[ASN][1000 genomes]
rs62053947	1.00[ASN][1000 genomes]
rs62053948	1.00[ASN][1000 genomes]
rs62053949	1.00[ASN][1000 genomes]
rs62053950	1.00[ASN][1000 genomes]
rs62053951	1.00[ASN][1000 genomes]
rs62053952	1.00[ASN][1000 genomes]
rs62053953	1.00[ASN][1000 genomes]
rs62053954	1.00[ASN][1000 genomes]
rs62053955	1.00[ASN][1000 genomes]
rs62053956	1.00[ASN][1000 genomes]
rs62053957	1.00[ASN][1000 genomes]
rs62053958	1.00[ASN][1000 genomes]
rs62053959	1.00[ASN][1000 genomes]
rs62054372	1.00[ASN][1000 genomes]
rs62054378	1.00[ASN][1000 genomes]
rs62054384	1.00[ASN][1000 genomes]
rs62054387	1.00[ASN][1000 genomes]
rs62054388	1.00[ASN][1000 genomes]
rs62055660	1.00[ASN][1000 genomes]
rs62055661	1.00[ASN][1000 genomes]
rs62055662	1.00[ASN][1000 genomes]
rs62055663	1.00[ASN][1000 genomes]
rs62055664	1.00[ASN][1000 genomes]
rs62055665	1.00[ASN][1000 genomes]
rs62055689	1.00[ASN][1000 genomes]
rs62055691	1.00[ASN][1000 genomes]
rs62055692	1.00[ASN][1000 genomes]
rs62055693	1.00[ASN][1000 genomes]
rs62055696	1.00[ASN][1000 genomes]
rs62055697	1.00[ASN][1000 genomes]
rs62055698	1.00[ASN][1000 genomes]
rs62055700	1.00[ASN][1000 genomes]
rs62055701	1.00[ASN][1000 genomes]
rs62055702	1.00[ASN][1000 genomes]
rs62055704	1.00[ASN][1000 genomes]
rs62055705	1.00[ASN][1000 genomes]
rs62055707	1.00[ASN][1000 genomes]
rs62055708	1.00[ASN][1000 genomes]
rs62055709	1.00[ASN][1000 genomes]
rs62055710	1.00[ASN][1000 genomes]
rs62055712	1.00[ASN][1000 genomes]
rs62055713	1.00[ASN][1000 genomes]
rs62055714	1.00[ASN][1000 genomes]
rs62055715	1.00[ASN][1000 genomes]
rs62055716	1.00[ASN][1000 genomes]
rs62055717	1.00[ASN][1000 genomes]
rs62055751	1.00[ASN][1000 genomes]
rs62055752	1.00[ASN][1000 genomes]
rs62055753	1.00[ASN][1000 genomes]
rs62055754	1.00[ASN][1000 genomes]
rs62056874	1.00[ASN][1000 genomes]
rs62056875	1.00[ASN][1000 genomes]
rs62056876	1.00[ASN][1000 genomes]
rs62056877	1.00[ASN][1000 genomes]
rs62056878	1.00[ASN][1000 genomes]
rs62056879	1.00[ASN][1000 genomes]
rs62056880	1.00[ASN][1000 genomes]
rs62056881	1.00[ASN][1000 genomes]
rs62056905	1.00[ASN][1000 genomes]
rs62056906	1.00[ASN][1000 genomes]
rs62056908	1.00[ASN][1000 genomes]
rs62056909	1.00[ASN][1000 genomes]
rs62056910	1.00[ASN][1000 genomes]
rs62056911	1.00[ASN][1000 genomes]
rs62056912	1.00[ASN][1000 genomes]
rs62056913	1.00[ASN][1000 genomes]
rs62056915	1.00[ASN][1000 genomes]
rs62056916	1.00[ASN][1000 genomes]
rs62056917	1.00[ASN][1000 genomes]
rs62056918	1.00[ASN][1000 genomes]
rs62056919	1.00[ASN][1000 genomes]
rs62056920	1.00[ASN][1000 genomes]
rs62056921	1.00[ASN][1000 genomes]
rs62056922	1.00[ASN][1000 genomes]
rs62056925	1.00[ASN][1000 genomes]
rs62056926	1.00[ASN][1000 genomes]
rs62056927	1.00[ASN][1000 genomes]
rs62056928	1.00[ASN][1000 genomes]
rs62056929	1.00[ASN][1000 genomes]
rs62056930	1.00[ASN][1000 genomes]
rs62056931	1.00[ASN][1000 genomes]
rs62056932	1.00[ASN][1000 genomes]
rs62056933	1.00[ASN][1000 genomes]
rs62056934	1.00[ASN][1000 genomes]
rs62056935	1.00[ASN][1000 genomes]
rs62056936	1.00[ASN][1000 genomes]
rs62056937	1.00[ASN][1000 genomes]
rs62056939	1.00[ASN][1000 genomes]
rs62056940	1.00[ASN][1000 genomes]
rs62056946	1.00[ASN][1000 genomes]
rs62064364	1.00[ASN][1000 genomes]
rs62064597	0.89[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62064598	0.83[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62064600	0.83[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62064603	0.83[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62064637	0.85[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62064641	0.91[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62064643	0.93[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62064645	0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62064646	0.84[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs62064647	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62064649	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62064651	0.96[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs62064652	0.96[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs62064654	0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62064655	0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62064657	0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62065374	0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62065376	0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62065377	0.86[AFR][1000 genomes];0.98[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62065378	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62065379	0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62065380	0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62065385	0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62065389	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62065391	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62065392	0.84[AFR][1000 genomes];0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62065393	0.80[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs62065399	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62065403	0.87[AFR][1000 genomes];0.88[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62065404	0.87[AFR][1000 genomes];0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62065436	0.86[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62065437	0.88[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62065438	0.86[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62065441	0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62065442	0.86[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62065444	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62065445	0.86[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62065447	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62065448	0.84[AMR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62065449	0.84[AMR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62065452	1.00[ASN][1000 genomes]
rs62065453	1.00[ASN][1000 genomes]
rs62065459	1.00[ASN][1000 genomes]
rs62066128	1.00[ASN][1000 genomes]
rs62066460	1.00[ASN][1000 genomes]
rs71238846	0.87[AFR][1000 genomes];0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs71373560	0.93[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs71373572	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7209501	0.84[AFR][1000 genomes];0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7220206	0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7222389	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7222444	0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73984391	0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7502718	1.00[ASN][1000 genomes]
rs7502937	1.00[ASN][1000 genomes]
rs8071011	0.91[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs9730	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:50 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv431632	chr17:43199763-43733983	Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' Active TSS Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	210 gene(s)	inside rSNPs	diseases
2	nsv431633	chr17:43199763-43772540	Enhancers Flanking Active TSS Strong transcription Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Weak transcription Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	210 gene(s)	inside rSNPs	diseases
3	nsv431634	chr17:43346980-43659975	Weak transcription Active TSS Enhancers Genic enhancers Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	56 gene(s)	inside rSNPs	diseases
4	nsv431636	chr17:43403005-43659881	Active TSS Genic enhancers Enhancers Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	39 gene(s)	inside rSNPs	diseases
5	esv2754858	chr17:43403005-43666906	Weak transcription Flanking Bivalent TSS/Enh Enhancers Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS Bivalent Enhancer Active TSS Strong transcription ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	44 gene(s)	inside rSNPs	diseases
6	nsv431637	chr17:43403005-43716885	Genic enhancers Strong transcription Enhancers Flanking Active TSS Weak transcription Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	49 gene(s)	inside rSNPs	diseases
7	nsv428342	chr17:43443554-43651084	Weak transcription Enhancers Flanking Active TSS Bivalent/Poised TSS Active TSS Strong transcription Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	32 gene(s)	inside rSNPs	diseases
8	esv2757659	chr17:43457886-43733983	Enhancers Flanking Active TSS Genic enhancers Strong transcription Active TSS Weak transcription Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	45 gene(s)	inside rSNPs	diseases
9	esv2758691	chr17:43457886-43816023	Enhancers Flanking Active TSS Genic enhancers Active TSS Weak transcription Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	47 gene(s)	inside rSNPs	diseases
10	esv2755280	chr17:43459697-43666906	Strong transcription Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Enhancers Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	40 gene(s)	inside rSNPs	diseases
11	nsv908304	chr17:43467025-43524511	Enhancers Genic enhancers Flanking Active TSS Strong transcription Bivalent Enhancer Weak transcription Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	20 gene(s)	inside rSNPs	diseases
12	nsv1065930	chr17:43467291-44151468	Weak transcription Active TSS Bivalent/Poised TSS Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	51 gene(s)	inside rSNPs	diseases
13	nsv431638	chr17:43470156-43693538	Strong transcription Enhancers Weak transcription Active TSS Bivalent Enhancer Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	41 gene(s)	inside rSNPs	diseases
14	esv2755741	chr17:43470760-43655688	Bivalent/Poised TSS Strong transcription Weak transcription Flanking Active TSS Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	32 gene(s)	inside rSNPs	diseases
15	nsv431639	chr17:43470760-43659355	Bivalent Enhancer Enhancers Weak transcription Genic enhancers Active TSS Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	32 gene(s)	inside rSNPs	diseases
16	esv2754089	chr17:43470760-43659881	Enhancers Weak transcription Active TSS Genic enhancers Strong transcription Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	33 gene(s)	inside rSNPs	diseases
17	esv34266	chr17:43470760-43659975	Enhancers Weak transcription Active TSS Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	33 gene(s)	inside rSNPs	diseases
18	esv34577	chr17:43470760-43659975	Genic enhancers Weak transcription Bivalent/Poised TSS Strong transcription Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	33 gene(s)	inside rSNPs	diseases
19	esv2752564	chr17:43470760-43659975	Weak transcription Genic enhancers Strong transcription Enhancers Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	33 gene(s)	inside rSNPs	diseases
20	esv2753343	chr17:43470760-43659975	Enhancers Bivalent Enhancer Strong transcription Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	33 gene(s)	inside rSNPs	diseases
21	esv2753852	chr17:43470760-43659975	Active TSS Strong transcription Flanking Bivalent TSS/Enh Weak transcription Enhancers Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	33 gene(s)	inside rSNPs	diseases
22	esv2754692	chr17:43470760-43659975	Weak transcription Flanking Active TSS Enhancers Bivalent Enhancer Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	33 gene(s)	inside rSNPs	diseases
23	esv2754773	chr17:43470760-43659975	Strong transcription Bivalent Enhancer Enhancers Genic enhancers Weak transcription Flanking Active TSS Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	33 gene(s)	inside rSNPs	diseases
24	esv2754821	chr17:43470760-43659975	Genic enhancers Strong transcription Enhancers Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	33 gene(s)	inside rSNPs	diseases
25	esv2755261	chr17:43470760-43659975	Flanking Bivalent TSS/Enh Weak transcription Enhancers Genic enhancers Strong transcription Flanking Active TSS Bivalent Enhancer Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	33 gene(s)	inside rSNPs	diseases
26	esv2755434	chr17:43470760-43659975	Strong transcription Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	33 gene(s)	inside rSNPs	diseases
27	esv2755618	chr17:43470760-43659975	Enhancers Flanking Active TSS Weak transcription Strong transcription Active TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	33 gene(s)	inside rSNPs	diseases
28	esv2756206	chr17:43470760-43659975	Flanking Active TSS Weak transcription Enhancers Active TSS Strong transcription Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	33 gene(s)	inside rSNPs	diseases
29	esv2756211	chr17:43470760-43659975	Bivalent/Poised TSS Active TSS Strong transcription Flanking Active TSS Enhancers Weak transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	33 gene(s)	inside rSNPs	diseases
30	esv2756238	chr17:43470760-43659975	Weak transcription Strong transcription Genic enhancers Enhancers Bivalent Enhancer Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	33 gene(s)	inside rSNPs	diseases
31	esv2756640	chr17:43470760-43659975	Flanking Active TSS Genic enhancers Strong transcription Weak transcription Enhancers Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	33 gene(s)	inside rSNPs	diseases
32	esv34307	chr17:43470760-43666906	Enhancers Genic enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Strong transcription Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	38 gene(s)	inside rSNPs	diseases
33	esv2755466	chr17:43470760-43666906	Enhancers Flanking Active TSS Active TSS Weak transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	38 gene(s)	inside rSNPs	diseases
34	esv2756448	chr17:43470760-43666906	Weak transcription Strong transcription Enhancers Flanking Active TSS Bivalent Enhancer Active TSS Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	38 gene(s)	inside rSNPs	diseases
35	nsv431640	chr17:43470760-43666906	Weak transcription Enhancers Active TSS Genic enhancers Flanking Bivalent TSS/Enh Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	38 gene(s)	inside rSNPs	diseases
36	esv2753768	chr17:43470760-43734304	Weak transcription Enhancers Flanking Bivalent TSS/Enh Strong transcription Flanking Active TSS Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	43 gene(s)	inside rSNPs	diseases
37	esv2754725	chr17:43470760-43741452	Flanking Active TSS Strong transcription Enhancers Genic enhancers Weak transcription Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	43 gene(s)	inside rSNPs	diseases
38	esv2752397	chr17:43485791-43659975	Enhancers Strong transcription Weak transcription Flanking Active TSS Bivalent Enhancer Genic enhancers Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	31 gene(s)	inside rSNPs	diseases
39	esv2753431	chr17:43485791-43659975	Weak transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer Genic enhancers Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	31 gene(s)	inside rSNPs	diseases
40	esv2755266	chr17:43485791-43659975	Weak transcription Flanking Active TSS Enhancers Strong transcription Active TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	31 gene(s)	inside rSNPs	diseases
41	esv2755477	chr17:43485791-43659975	Enhancers Strong transcription Weak transcription Bivalent/Poised TSS Active TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	31 gene(s)	inside rSNPs	diseases
42	esv2755480	chr17:43485791-43659975	Weak transcription Strong transcription Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Enhancers Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	31 gene(s)	inside rSNPs	diseases
43	esv2756392	chr17:43485791-43659975	Enhancers Genic enhancers Weak transcription Active TSS Flanking Active TSS Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	31 gene(s)	inside rSNPs	diseases
44	nsv431641	chr17:43485791-43659975	Enhancers Bivalent/Poised TSS Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS Genic enhancers Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	31 gene(s)	inside rSNPs	diseases
45	esv35084	chr17:43485791-43666906	Flanking Bivalent TSS/Enh Weak transcription Active TSS Enhancers Bivalent/Poised TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	36 gene(s)	inside rSNPs	diseases
46	esv2754833	chr17:43485791-43666906	Transcr. at gene 5' and 3' Active TSS Flanking Active TSS Bivalent Enhancer Enhancers Weak transcription Flanking Bivalent TSS/Enh Strong transcription Genic enhancers Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	36 gene(s)	inside rSNPs	diseases
47	nsv431643	chr17:43485791-43666906	Enhancers Bivalent/Poised TSS Strong transcription Active TSS Weak transcription Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	36 gene(s)	inside rSNPs	diseases
48	nsv431642	chr17:43485791-43716885	Strong transcription Active TSS Weak transcription Enhancers Flanking Active TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	41 gene(s)	inside rSNPs	diseases
49	esv3419760	chr17:43504769-43509567	Weak transcription Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Active TSS Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region	9 gene(s)	inside rSNPs	diseases
50	nsv9562	chr17:43508843-43534167	Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Strong transcription Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases

mRNA abundance (count:6)

SNP	Gene	Cis/trans	Tissue	Source
rs62064653	LRRC37A4	Cis_1M	lymphoblastoid	RTeQTL
rs62064653	LOC644246	Cis_1M	lymphoblastoid	RTeQTL
rs62064653	ARL17	Cis_1M	lymphoblastoid	RTeQTL
rs62064653	LRRC37A4	cis	multi-tissue	Pritchard
rs62064653	ARHGAP27	Cis_1M	lymphoblastoid	RTeQTL
rs62064653	MAPK8IP1	trans	lymphoblastoid	RTeQTL

Chromatin state (count:125 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr17:43506000-43510400	Bivalent/Poised TSS	HUES64 Cell Line	embryonic stem cell
2	chr17:43506000-43510600	Bivalent/Poised TSS	ES-I3 Cell Line	embryonic stem cell
3	chr17:43506200-43510400	Bivalent/Poised TSS	HUES48 Cell Line	embryonic stem cell
4	chr17:43506400-43510600	Bivalent/Poised TSS	HUES6 Cell Line	embryonic stem cell
5	chr17:43507800-43510200	Flanking Bivalent TSS/Enh	Stomach Smooth Muscle	stomach
6	chr17:43507800-43510600	Bivalent/Poised TSS	iPS-20b Cell Line	embryonic stem cell
7	chr17:43507800-43510600	Active TSS	Esophagus	oesophagus
8	chr17:43507800-43511000	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
9	chr17:43508000-43510000	Flanking Active TSS	Primary hematopoietic stem cells	blood
10	chr17:43508000-43510000	Flanking Active TSS	Primary Natural Killer cells fromperipheralblood	blood
11	chr17:43508000-43510000	Flanking Bivalent TSS/Enh	Ganglion Eminence derived primary cultured neurospheres	brain
12	chr17:43508000-43510000	Flanking Bivalent TSS/Enh	Foreskin Fibroblast Primary Cells skin01	Skin
13	chr17:43508000-43510000	Flanking Bivalent TSS/Enh	Foreskin Melanocyte Primary Cells skin03	Skin
14	chr17:43508000-43510000	Flanking Bivalent TSS/Enh	Fetal Adrenal Gland	Adrenal Gland
15	chr17:43508000-43510000	Flanking Bivalent TSS/Enh	Fetal Muscle Leg	muscle
16	chr17:43508000-43510000	Flanking Bivalent TSS/Enh	Fetal Stomach	stomach
17	chr17:43508000-43510000	Flanking Bivalent TSS/Enh	Skeletal Muscle Male	skeletal muscle
18	chr17:43508000-43510600	Bivalent/Poised TSS	iPS-18 Cell Line	embryonic stem cell
19	chr17:43508000-43510600	Flanking Active TSS	Primary T helper cells fromperipheralblood	blood
20	chr17:43508000-43510800	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
21	chr17:43508200-43509400	Flanking Bivalent TSS/Enh	ES-UCSF4 Cell Line	embryonic stem cell
22	chr17:43508200-43509600	Active TSS	Pancreatic Islets	Pancreatic Islet
23	chr17:43508200-43510000	Flanking Active TSS	Adipose Nuclei	Adipose
24	chr17:43508200-43510200	Active TSS	Placenta Amnion	Placenta Amnion
25	chr17:43508200-43510400	Active TSS	Breast Myoepithelial Primary Cells	Breast
26	chr17:43508200-43510600	Bivalent/Poised TSS	H1 Cell Line	embryonic stem cell
27	chr17:43508200-43510600	Active TSS	H9 Cell Line	embryonic stem cell
28	chr17:43508200-43510800	Flanking Active TSS	Primary hematopoietic stem cells short term culture	blood
29	chr17:43508400-43509800	Flanking Active TSS	Duodenum Mucosa	Duodenum
30	chr17:43508400-43510000	Bivalent/Poised TSS	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
31	chr17:43508400-43510000	Flanking Bivalent TSS/Enh	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
32	chr17:43508400-43510000	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
33	chr17:43508400-43510000	Flanking Active TSS	Primary T cells from cord blood	blood
34	chr17:43508400-43510000	Active TSS	Aorta	Aorta
35	chr17:43508400-43510000	Flanking Active TSS	Liver	Liver
36	chr17:43508400-43510000	Flanking Bivalent TSS/Enh	Fetal Thymus	thymus
37	chr17:43508400-43510200	Flanking Active TSS	Primary B cells from cord blood	blood
38	chr17:43508400-43510400	Active TSS	ES-WA7 Cell Line	embryonic stem cell
39	chr17:43508400-43510400	Active TSS	Small Intestine	intestine
40	chr17:43508600-43509400	Flanking Bivalent TSS/Enh	H9 Derived Neuron Cultured Cells	ES cell derived
41	chr17:43508600-43509400	Flanking Active TSS	iPS DF 19.11 Cell Line	embryonic stem cell
42	chr17:43508600-43509600	Active TSS	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
43	chr17:43508600-43509600	Active TSS	K562	blood
44	chr17:43508600-43509800	Bivalent/Poised TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
45	chr17:43508600-43510000	Flanking Active TSS	Primary mononuclear cells fromperipheralblood	Blood
46	chr17:43508600-43510000	Flanking Bivalent TSS/Enh	Fetal Muscle Trunk	muscle
47	chr17:43508600-43510000	Active TSS	Gastric	stomach
48	chr17:43508600-43510000	Flanking Active TSS	Pancreas	Pancrea
49	chr17:43508600-43510600	Active TSS	iPS-15b Cell Line	embryonic stem cell
50	chr17:43508600-43510600	Active TSS	iPS DF 6.9 Cell Line	embryonic stem cell

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