The 2.0 version of rSNPBase

Variant report

Variant rs62065374
Chromosome Location chr17:43520272-43520273
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:114 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:43509800-43523600 Weak transcription Primary T killer memory cells from peripheral blood blood
2 chr17:43510000-43523000 Weak transcription HSMM muscle
3 chr17:43510000-43523200 Weak transcription NHDF-Ad bronchial
4 chr17:43510200-43548200 Weak transcription Pancreatic Islets Pancreatic Islet
5 chr17:43510400-43539200 Weak transcription Osteobl bone
6 chr17:43510600-43523600 Weak transcription Primary T helper naive cells from peripheral blood blood
7 chr17:43510800-43522800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
8 chr17:43510800-43530000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr17:43510800-43567200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr17:43512400-43524200 Strong transcription Primary mononuclear cells fromperipheralblood Blood
11 chr17:43512600-43523600 Strong transcription Monocytes-CD14+_RO01746 blood
12 chr17:43512600-43525200 Strong transcription Primary neutrophils fromperipheralblood blood
13 chr17:43513800-43528200 Weak transcription Fetal Brain Male brain
14 chr17:43515000-43522400 Weak transcription Fetal Lung lung
15 chr17:43515400-43531200 Weak transcription Small Intestine intestine
16 chr17:43515600-43539200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
17 chr17:43515600-43549600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
18 chr17:43516800-43522600 Weak transcription Muscle Satellite Cultured Cells --
19 chr17:43516800-43522800 Weak transcription Liver Liver
20 chr17:43516800-43530400 Weak transcription Brain Germinal Matrix brain
21 chr17:43516800-43531200 Weak transcription Ovary ovary
22 chr17:43516800-43531800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
23 chr17:43517000-43522200 Weak transcription Brain Anterior Caudate brain
24 chr17:43517000-43531000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
25 chr17:43517000-43549800 Weak transcription Left Ventricle heart
26 chr17:43517400-43521400 Weak transcription Adipose Nuclei Adipose
27 chr17:43517400-43521400 Enhancers Fetal Thymus thymus
28 chr17:43517400-43521800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
29 chr17:43517400-43522400 Weak transcription Stomach Smooth Muscle stomach
30 chr17:43517400-43522400 Weak transcription Dnd41 blood
31 chr17:43517600-43521800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
32 chr17:43517600-43522400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
33 chr17:43517600-43522400 Weak transcription Brain Angular Gyrus brain
34 chr17:43517600-43524400 Weak transcription Fetal Brain Female brain
35 chr17:43517800-43521600 Weak transcription Brain Cingulate Gyrus brain
36 chr17:43517800-43521800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
37 chr17:43518000-43521400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
38 chr17:43518000-43521800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
39 chr17:43518000-43522400 Weak transcription Duodenum Smooth Muscle Duodenum
40 chr17:43518000-43523000 Weak transcription K562 blood
41 chr17:43518000-43523400 Weak transcription Primary T regulatory cells fromperipheralblood blood
42 chr17:43518000-43527200 Weak transcription Right Ventricle heart
43 chr17:43518000-43531800 Strong transcription Fetal Intestine Small intestine
44 chr17:43518000-43534000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
45 chr17:43518000-43552600 Weak transcription Cortex derived primary cultured neurospheres brain
46 chr17:43518200-43521400 Weak transcription Fetal Intestine Large intestine
47 chr17:43518200-43522400 Weak transcription Rectal Mucosa Donor 31 rectum
48 chr17:43518200-43522600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
49 chr17:43518200-43522600 Weak transcription Brain Hippocampus Middle brain
50 chr17:43518200-43523000 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin

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Last update: Aug 31, 2015