Variant report
Variant | rs62065393 |
---|---|
Chromosome Location | chr17:43539437-43539438 |
allele | C/G |
Outlinks | Ensembl   UCSC |
- TF binding region (count:75)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No. | Transcrition factor | Chromosome Location | Cell Line | Cell type | Cell Stage | Matched TF binding sites |
---|---|---|---|---|---|---|
1 | POLR2A | chr17:43539114-43539597 | Hela-S3 | cervix: | n/a | n/a |
2 | EP300 | chr17:43539199-43539571 | HepG2 | liver: | n/a | chr17:43539343-43539352 |
3 | BATF | chr17:43539245-43539723 | GM12878 | blood: | n/a | chr17:43539341-43539351 |
4 | POLR2A | chr17:43538844-43539877 | GM12891 | blood: | n/a | n/a |
5 | IRF4 | chr17:43539134-43539731 | GM12878 | blood: | n/a | n/a |
6 | EBF1 | chr17:43539239-43539785 | GM12878 | blood: | n/a | chr17:43539570-43539579 chr17:43539568-43539579 chr17:43539568-43539581 chr17:43539569-43539579 |
7 | FOXA2 | chr17:43539237-43539540 | HepG2 | liver: | n/a | n/a |
8 | FOSL2 | chr17:43539031-43539690 | HepG2 | liver: | n/a | chr17:43539343-43539354 chr17:43539344-43539353 |
9 | FOXA1 | chr17:43539101-43539585 | HepG2 | liver: | n/a | n/a |
10 | FOXA1 | chr17:43539179-43539632 | HepG2 | liver: | n/a | n/a |
11 | SP1 | chr17:43539086-43539583 | HepG2 | liver: | n/a | chr17:43539119-43539133 |
12 | POLR2A | chr17:43538862-43539884 | GM12891 | blood: | n/a | n/a |
13 | RXRA | chr17:43539217-43539538 | HepG2 | liver: | n/a | chr17:43539343-43539352 |
14 | POLR2A | chr17:43539074-43539733 | GM12892 | blood: | n/a | n/a |
15 | BATF | chr17:43539129-43539777 | GM12878 | blood: | n/a | chr17:43539341-43539351 |
16 | FOS | chr17:43539298-43539463 | MCF10A-Er-Src | breast: | n/a | chr17:43539344-43539353 |
17 | BCL11A | chr17:43539207-43539750 | GM12878 | blood: | n/a | chr17:43539343-43539352 |
18 | POLR2A | chr17:43538756-43539983 | GM12892 | blood: | n/a | n/a |
19 | JUND | chr17:43539041-43539564 | A549 | lung: | n/a | chr17:43539344-43539353 chr17:43539342-43539353 |
20 | TCF3 | chr17:43539275-43539798 | GM12878 | blood: | n/a | n/a |
21 | RUNX3 | chr17:43539211-43539588 | GM12878 | blood: | n/a | n/a |
22 | POU2F2 | chr17:43538822-43539747 | GM12878 | blood: | n/a | n/a |
23 | POLR2A | chr17:43539091-43539761 | GM12891 | blood: | n/a | n/a |
24 | FOXP2 | chr17:43539266-43539603 | PFSK-1 | brain: | n/a | n/a |
25 | PAX5 | chr17:43539295-43539792 | GM12878 | blood: | n/a | chr17:43539337-43539346 |
26 | POLR2A | chr17:43539234-43539488 | HCT-116 | colon: | n/a | n/a |
27 | MYC | chr17:43539255-43539498 | MCF-7 | breast: | n/a | chr17:43539343-43539352 |
28 | PAX5 | chr17:43539343-43539731 | GM12878 | blood: | n/a | n/a |
29 | POLR2A | chr17:43538825-43540079 | GM12878 | blood: | n/a | n/a |
30 | POLR2A | chr17:43538813-43539965 | GM12892 | blood: | n/a | n/a |
31 | FOXA2 | chr17:43538986-43539803 | A549 | lung: | n/a | n/a |
32 | PAX5 | chr17:43539242-43539745 | GM12878 | blood: | n/a | chr17:43539337-43539346 |
33 | FOSL1 | chr17:43539229-43539447 | HCT-116 | colon: | n/a | chr17:43539344-43539353 |
34 | IRF4 | chr17:43539162-43539806 | GM12878 | blood: | n/a | n/a |
35 | PAX5 | chr17:43539057-43539939 | GM12878 | blood: | n/a | chr17:43539337-43539346 |
36 | POLR2A | chr17:43539062-43539928 | GM12878 | blood: | n/a | n/a |
37 | SP1 | chr17:43538822-43539862 | GM12878 | blood: | n/a | chr17:43539044-43539065 chr17:43539119-43539133 |
38 | POLR2A | chr17:43538938-43539631 | GM12878 | blood: | n/a | n/a |
39 | SP1 | chr17:43539112-43539775 | GM12878 | blood: | n/a | chr17:43539119-43539133 |
40 | BCL11A | chr17:43539372-43539782 | GM12878 | blood: | n/a | chr17:43539748-43539756 |
41 | POLR2A | chr17:43538941-43539607 | GM12878 | blood: | n/a | n/a |
42 | FOSL2 | chr17:43538905-43539652 | HepG2 | liver: | n/a | chr17:43539343-43539354 chr17:43539344-43539353 |
43 | POLR2A | chr17:43539222-43539524 | HCT-116 | colon: | n/a | n/a |
44 | PBX3 | chr17:43539406-43539877 | GM12878 | blood: | n/a | n/a |
45 | FOXA1 | chr17:43539198-43539616 | HepG2 | liver: | n/a | n/a |
46 | SPI1 | chr17:43539089-43539736 | GM12891 | blood: | n/a | chr17:43539120-43539133 |
47 | JUND | chr17:43539248-43539448 | HepG2 | liver: | n/a | chr17:43539344-43539353 chr17:43539342-43539353 |
48 | FOSL1 | chr17:43539201-43539460 | HCT-116 | colon: | n/a | chr17:43539344-43539353 |
49 | SP1 | chr17:43538983-43539626 | A549 | lung: | n/a | chr17:43539044-43539065 chr17:43539119-43539133 |
50 | POLR2A | chr17:43539136-43539630 | Hela-S3 | cervix: | n/a | n/a |
No data |
No data |
No data |
No data |
No data |
Variant related genes | Relation type |
---|---|
PLEKHM1 | TF binding region |
rs_ID | r2[population] |
---|---|
rs10451283 | 1.00[ASN][1000 genomes] |
rs11012 | 0.82[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs1105569 | 1.00[ASN][1000 genomes] |
rs1105570 | 1.00[ASN][1000 genomes] |
rs1105571 | 1.00[ASN][1000 genomes] |
rs12452273 | 1.00[ASN][1000 genomes] |
rs12939187 | 0.82[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs12940792 | 1.00[ASN][1000 genomes] |
rs12942666 | 1.00[ASN][1000 genomes] |
rs12942951 | 1.00[ASN][1000 genomes] |
rs12946900 | 0.82[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs12947718 | 1.00[ASN][1000 genomes] |
rs12950965 | 1.00[ASN][1000 genomes] |
rs12952764 | 1.00[ASN][1000 genomes] |
rs1526125 | 1.00[ASN][1000 genomes] |
rs1526126 | 1.00[ASN][1000 genomes] |
rs1568949 | 1.00[ASN][1000 genomes] |
rs1568950 | 1.00[ASN][1000 genomes] |
rs1568951 | 1.00[ASN][1000 genomes] |
rs1608955 | 1.00[ASN][1000 genomes] |
rs1608956 | 1.00[ASN][1000 genomes] |
rs16940633 | 1.00[ASN][1000 genomes] |
rs1706748 | 1.00[ASN][1000 genomes] |
rs17563599 | 1.00[ASN][1000 genomes] |
rs17563683 | 1.00[ASN][1000 genomes] |
rs17563718 | 1.00[ASN][1000 genomes] |
rs17563787 | 1.00[ASN][1000 genomes] |
rs17563800 | 1.00[ASN][1000 genomes] |
rs17563827 | 1.00[ASN][1000 genomes] |
rs17563861 | 1.00[ASN][1000 genomes] |
rs17563889 | 1.00[ASN][1000 genomes] |
rs17563923 | 1.00[ASN][1000 genomes] |
rs17631303 | 0.84[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs17631676 | 1.00[ASN][1000 genomes] |
rs17649138 | 1.00[ASN][1000 genomes] |
rs17649162 | 1.00[ASN][1000 genomes] |
rs17686610 | 1.00[ASN][1000 genomes] |
rs17687462 | 1.00[ASN][1000 genomes] |
rs17687504 | 1.00[ASN][1000 genomes] |
rs17687534 | 1.00[ASN][1000 genomes] |
rs17687571 | 1.00[ASN][1000 genomes] |
rs17687625 | 1.00[ASN][1000 genomes] |
rs17687667 | 1.00[ASN][1000 genomes] |
rs17687740 | 1.00[ASN][1000 genomes] |
rs17687838 | 1.00[ASN][1000 genomes] |
rs17687849 | 1.00[ASN][1000 genomes] |
rs17688002 | 1.00[ASN][1000 genomes] |
rs17688032 | 1.00[ASN][1000 genomes] |
rs17688056 | 1.00[ASN][1000 genomes] |
rs17688068 | 1.00[ASN][1000 genomes] |
rs17688090 | 1.00[ASN][1000 genomes] |
rs17688126 | 1.00[ASN][1000 genomes] |
rs17688205 | 1.00[ASN][1000 genomes] |
rs17688249 | 1.00[ASN][1000 genomes] |
rs17688296 | 1.00[ASN][1000 genomes] |
rs17688767 | 1.00[ASN][1000 genomes] |
rs17688773 | 1.00[ASN][1000 genomes] |
rs17688875 | 1.00[ASN][1000 genomes] |
rs17688916 | 1.00[ASN][1000 genomes] |
rs17688922 | 1.00[ASN][1000 genomes] |
rs17688944 | 1.00[ASN][1000 genomes] |
rs17689104 | 1.00[ASN][1000 genomes] |
rs17689116 | 1.00[ASN][1000 genomes] |
rs17689182 | 1.00[ASN][1000 genomes] |
rs17689218 | 1.00[ASN][1000 genomes] |
rs17760577 | 1.00[ASN][1000 genomes] |
rs17760631 | 1.00[ASN][1000 genomes] |
rs17760733 | 1.00[ASN][1000 genomes] |
rs17760817 | 1.00[ASN][1000 genomes] |
rs17761046 | 1.00[ASN][1000 genomes] |
rs17761100 | 1.00[ASN][1000 genomes] |
rs17761124 | 1.00[ASN][1000 genomes] |
rs17761207 | 1.00[ASN][1000 genomes] |
rs17761387 | 1.00[ASN][1000 genomes] |
rs17761581 | 1.00[ASN][1000 genomes] |
rs17762073 | 1.00[ASN][1000 genomes] |
rs17762165 | 1.00[ASN][1000 genomes] |
rs17762308 | 1.00[ASN][1000 genomes] |
rs17762361 | 1.00[ASN][1000 genomes] |
rs17762535 | 1.00[ASN][1000 genomes] |
rs1879581 | 0.86[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs1879582 | 1.00[ASN][1000 genomes] |
rs1879583 | 0.85[AMR][1000 genomes] |
rs1879585 | 0.80[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs1879586 | 0.84[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs1880749 | 1.00[ASN][1000 genomes] |
rs1880750 | 1.00[ASN][1000 genomes] |
rs1880752 | 1.00[ASN][1000 genomes] |
rs1971374 | 1.00[ASN][1000 genomes] |
rs2004260 | 1.00[ASN][1000 genomes] |
rs2028078 | 1.00[ASN][1000 genomes] |
rs2077606 | 0.82[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs2090847 | 0.80[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs2139890 | 0.86[AMR][1000 genomes];0.80[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs2253488 | 1.00[ASN][1000 genomes] |
rs241020 | 1.00[ASN][1000 genomes] |
rs241021 | 1.00[ASN][1000 genomes] |
rs241028 | 1.00[ASN][1000 genomes] |
rs241032 | 1.00[ASN][1000 genomes] |
rs241033 | 1.00[ASN][1000 genomes] |
rs241041 | 1.00[ASN][1000 genomes] |
rs2458179 | 1.00[ASN][1000 genomes] |
rs2458187 | 1.00[ASN][1000 genomes] |
rs2462835 | 1.00[ASN][1000 genomes] |
rs2463523 | 1.00[ASN][1000 genomes] |
rs2668644 | 1.00[ASN][1000 genomes] |
rs2684526 | 0.84[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs2693359 | 1.00[ASN][1000 genomes] |
rs2693362 | 1.00[ASN][1000 genomes] |
rs2864087 | 1.00[ASN][1000 genomes] |
rs2902661 | 1.00[ASN][1000 genomes] |
rs2902662 | 1.00[ASN][1000 genomes] |
rs2942164 | 1.00[ASN][1000 genomes] |
rs2942165 | 1.00[ASN][1000 genomes] |
rs2942166 | 1.00[ASN][1000 genomes] |
rs2942167 | 1.00[ASN][1000 genomes] |
rs2942168 | 1.00[ASN][1000 genomes] |
rs2942169 | 1.00[ASN][1000 genomes] |
rs2942170 | 1.00[ASN][1000 genomes] |
rs2959992 | 1.00[ASN][1000 genomes] |
rs2960000 | 1.00[ASN][1000 genomes] |
rs3108317 | 1.00[ASN][1000 genomes] |
rs34018943 | 0.82[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs34063617 | 1.00[ASN][1000 genomes] |
rs34104358 | 0.82[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs3418 | 1.00[ASN][1000 genomes] |
rs34286926 | 1.00[ASN][1000 genomes] |
rs34363898 | 0.82[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs34465449 | 0.82[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs34792542 | 1.00[ASN][1000 genomes] |
rs34887474 | 0.82[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs34915103 | 1.00[ASN][1000 genomes] |
rs35327136 | 1.00[ASN][1000 genomes] |
rs35389313 | 1.00[ASN][1000 genomes] |
rs35489312 | 0.84[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs35519908 | 1.00[ASN][1000 genomes] |
rs35884427 | 1.00[ASN][1000 genomes] |
rs36078910 | 1.00[ASN][1000 genomes] |
rs36114997 | 0.84[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs365825 | 1.00[ASN][1000 genomes] |
rs383241 | 1.00[ASN][1000 genomes] |
rs385691 | 1.00[ASN][1000 genomes] |
rs389217 | 1.00[ASN][1000 genomes] |
rs389978 | 1.00[ASN][1000 genomes] |
rs392116 | 1.00[ASN][1000 genomes] |
rs393152 | 1.00[ASN][1000 genomes] |
rs393675 | 1.00[ASN][1000 genomes] |
rs393838 | 1.00[ASN][1000 genomes] |
rs3946526 | 0.91[AFR][1000 genomes];0.87[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs396593 | 1.00[ASN][1000 genomes] |
rs3972613 | 1.00[ASN][1000 genomes] |
rs413778 | 1.00[ASN][1000 genomes] |
rs413917 | 1.00[ASN][1000 genomes] |
rs422112 | 1.00[ASN][1000 genomes] |
rs424243 | 1.00[ASN][1000 genomes] |
rs434428 | 1.00[ASN][1000 genomes] |
rs434598 | 1.00[ASN][1000 genomes] |
rs434805 | 1.00[ASN][1000 genomes] |
rs434971 | 1.00[ASN][1000 genomes] |
rs4390635 | 1.00[ASN][1000 genomes] |
rs439558 | 1.00[ASN][1000 genomes] |
rs4401083 | 1.00[ASN][1000 genomes] |
rs4471726 | 1.00[ASN][1000 genomes] |
rs4479288 | 1.00[ASN][1000 genomes] |
rs4479289 | 1.00[ASN][1000 genomes] |
rs448830 | 1.00[ASN][1000 genomes] |
rs4569335 | 1.00[ASN][1000 genomes] |
rs4605208 | 1.00[ASN][1000 genomes] |
rs4609898 | 1.00[ASN][1000 genomes] |
rs4609899 | 1.00[ASN][1000 genomes] |
rs4617909 | 1.00[ASN][1000 genomes] |
rs4763 | 1.00[ASN][1000 genomes] |
rs5026246 | 0.81[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs55642947 | 0.84[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs55643511 | 1.00[ASN][1000 genomes] |
rs55648326 | 1.00[ASN][1000 genomes] |
rs55651627 | 1.00[ASN][1000 genomes] |
rs55652155 | 1.00[ASN][1000 genomes] |
rs55653963 | 1.00[ASN][1000 genomes] |
rs55663797 | 0.86[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs55669046 | 1.00[ASN][1000 genomes] |
rs55671319 | 0.80[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs55688739 | 1.00[ASN][1000 genomes] |
rs55703888 | 0.82[AMR][1000 genomes];0.80[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs55746869 | 1.00[ASN][1000 genomes] |
rs55787734 | 1.00[ASN][1000 genomes] |
rs55790407 | 0.82[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs55793500 | 1.00[ASN][1000 genomes] |
rs55849973 | 1.00[ASN][1000 genomes] |
rs55896111 | 1.00[ASN][1000 genomes] |
rs55914643 | 1.00[ASN][1000 genomes] |
rs55925547 | 1.00[ASN][1000 genomes] |
rs55947210 | 1.00[ASN][1000 genomes] |
rs55962674 | 1.00[ASN][1000 genomes] |
rs55972157 | 1.00[ASN][1000 genomes] |
rs55973918 | 1.00[ASN][1000 genomes] |
rs55974014 | 1.00[ASN][1000 genomes] |
rs55980621 | 1.00[ASN][1000 genomes] |
rs55989971 | 1.00[ASN][1000 genomes] |
rs56005713 | 0.82[AMR][1000 genomes];0.80[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs56006248 | 1.00[ASN][1000 genomes] |
rs56015792 | 1.00[ASN][1000 genomes] |
rs56020833 | 0.82[AMR][1000 genomes] |
rs56046792 | 1.00[ASN][1000 genomes] |
rs56062621 | 1.00[ASN][1000 genomes] |
rs56100013 | 1.00[ASN][1000 genomes] |
rs56110538 | 1.00[ASN][1000 genomes] |
rs56159231 | 0.84[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs56160448 | 1.00[ASN][1000 genomes] |
rs56167344 | 1.00[ASN][1000 genomes] |
rs56167560 | 1.00[ASN][1000 genomes] |
rs56168933 | 0.91[AFR][1000 genomes];0.84[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs56178230 | 1.00[ASN][1000 genomes] |
rs56192752 | 1.00[ASN][1000 genomes] |
rs56205560 | 1.00[ASN][1000 genomes] |
rs56212100 | 1.00[ASN][1000 genomes] |
rs56220242 | 1.00[ASN][1000 genomes] |
rs56220387 | 0.80[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs56236914 | 1.00[ASN][1000 genomes] |
rs56295996 | 1.00[ASN][1000 genomes] |
rs56298110 | 1.00[ASN][1000 genomes] |
rs56323722 | 1.00[ASN][1000 genomes] |
rs56323832 | 1.00[ASN][1000 genomes] |
rs56328224 | 0.81[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs56378631 | 1.00[ASN][1000 genomes] |
rs56380663 | 1.00[ASN][1000 genomes] |
rs56384960 | 1.00[ASN][1000 genomes] |
rs56397077 | 1.00[ASN][1000 genomes] |
rs56400821 | 1.00[ASN][1000 genomes] |
rs56406407 | 1.00[ASN][1000 genomes] |
rs593720 | 1.00[ASN][1000 genomes] |
rs61667602 | 1.00[ASN][1000 genomes] |
rs62053939 | 1.00[ASN][1000 genomes] |
rs62053940 | 1.00[ASN][1000 genomes] |
rs62053943 | 1.00[ASN][1000 genomes] |
rs62053945 | 1.00[ASN][1000 genomes] |
rs62053946 | 1.00[ASN][1000 genomes] |
rs62053947 | 1.00[ASN][1000 genomes] |
rs62053948 | 1.00[ASN][1000 genomes] |
rs62053949 | 1.00[ASN][1000 genomes] |
rs62053950 | 1.00[ASN][1000 genomes] |
rs62053951 | 1.00[ASN][1000 genomes] |
rs62053952 | 1.00[ASN][1000 genomes] |
rs62053953 | 1.00[ASN][1000 genomes] |
rs62053954 | 1.00[ASN][1000 genomes] |
rs62053955 | 1.00[ASN][1000 genomes] |
rs62053956 | 1.00[ASN][1000 genomes] |
rs62053957 | 1.00[ASN][1000 genomes] |
rs62053958 | 1.00[ASN][1000 genomes] |
rs62053959 | 1.00[ASN][1000 genomes] |
rs62054372 | 1.00[ASN][1000 genomes] |
rs62054378 | 1.00[ASN][1000 genomes] |
rs62054384 | 1.00[ASN][1000 genomes] |
rs62054387 | 1.00[ASN][1000 genomes] |
rs62054388 | 1.00[ASN][1000 genomes] |
rs62054389 | 1.00[ASN][1000 genomes] |
rs62054392 | 1.00[ASN][1000 genomes] |
rs62054393 | 1.00[ASN][1000 genomes] |
rs62054394 | 1.00[ASN][1000 genomes] |
rs62054395 | 1.00[ASN][1000 genomes] |
rs62054396 | 1.00[ASN][1000 genomes] |
rs62054397 | 1.00[ASN][1000 genomes] |
rs62054398 | 1.00[ASN][1000 genomes] |
rs62054399 | 1.00[ASN][1000 genomes] |
rs62054400 | 1.00[ASN][1000 genomes] |
rs62054411 | 1.00[ASN][1000 genomes] |
rs62054412 | 1.00[ASN][1000 genomes] |
rs62054413 | 1.00[ASN][1000 genomes] |
rs62054414 | 1.00[ASN][1000 genomes] |
rs62054417 | 1.00[ASN][1000 genomes] |
rs62054418 | 1.00[ASN][1000 genomes] |
rs62054419 | 1.00[ASN][1000 genomes] |
rs62054421 | 1.00[ASN][1000 genomes] |
rs62054424 | 1.00[ASN][1000 genomes] |
rs62054425 | 1.00[ASN][1000 genomes] |
rs62054426 | 1.00[ASN][1000 genomes] |
rs62054427 | 1.00[ASN][1000 genomes] |
rs62054428 | 1.00[ASN][1000 genomes] |
rs62055660 | 1.00[ASN][1000 genomes] |
rs62055661 | 1.00[ASN][1000 genomes] |
rs62055662 | 1.00[ASN][1000 genomes] |
rs62055663 | 1.00[ASN][1000 genomes] |
rs62055664 | 1.00[ASN][1000 genomes] |
rs62055665 | 1.00[ASN][1000 genomes] |
rs62055689 | 1.00[ASN][1000 genomes] |
rs62055691 | 1.00[ASN][1000 genomes] |
rs62055692 | 1.00[ASN][1000 genomes] |
rs62055693 | 1.00[ASN][1000 genomes] |
rs62055696 | 1.00[ASN][1000 genomes] |
rs62055697 | 1.00[ASN][1000 genomes] |
rs62055698 | 1.00[ASN][1000 genomes] |
rs62055700 | 1.00[ASN][1000 genomes] |
rs62055701 | 1.00[ASN][1000 genomes] |
rs62055702 | 1.00[ASN][1000 genomes] |
rs62055704 | 1.00[ASN][1000 genomes] |
rs62055705 | 1.00[ASN][1000 genomes] |
rs62055707 | 1.00[ASN][1000 genomes] |
rs62055708 | 1.00[ASN][1000 genomes] |
rs62055709 | 1.00[ASN][1000 genomes] |
rs62055710 | 1.00[ASN][1000 genomes] |
rs62055712 | 1.00[ASN][1000 genomes] |
rs62055713 | 1.00[ASN][1000 genomes] |
rs62055714 | 1.00[ASN][1000 genomes] |
rs62055715 | 1.00[ASN][1000 genomes] |
rs62055716 | 1.00[ASN][1000 genomes] |
rs62055717 | 1.00[ASN][1000 genomes] |
rs62055751 | 1.00[ASN][1000 genomes] |
rs62055752 | 1.00[ASN][1000 genomes] |
rs62055753 | 1.00[ASN][1000 genomes] |
rs62055754 | 1.00[ASN][1000 genomes] |
rs62056874 | 1.00[ASN][1000 genomes] |
rs62056875 | 1.00[ASN][1000 genomes] |
rs62056876 | 1.00[ASN][1000 genomes] |
rs62056877 | 1.00[ASN][1000 genomes] |
rs62056878 | 1.00[ASN][1000 genomes] |
rs62056879 | 1.00[ASN][1000 genomes] |
rs62056880 | 1.00[ASN][1000 genomes] |
rs62056881 | 1.00[ASN][1000 genomes] |
rs62056905 | 1.00[ASN][1000 genomes] |
rs62056906 | 1.00[ASN][1000 genomes] |
rs62056908 | 1.00[ASN][1000 genomes] |
rs62056909 | 1.00[ASN][1000 genomes] |
rs62056910 | 1.00[ASN][1000 genomes] |
rs62056911 | 1.00[ASN][1000 genomes] |
rs62056912 | 1.00[ASN][1000 genomes] |
rs62056913 | 1.00[ASN][1000 genomes] |
rs62056915 | 1.00[ASN][1000 genomes] |
rs62056916 | 1.00[ASN][1000 genomes] |
rs62056917 | 1.00[ASN][1000 genomes] |
rs62056918 | 1.00[ASN][1000 genomes] |
rs62056919 | 1.00[ASN][1000 genomes] |
rs62056920 | 1.00[ASN][1000 genomes] |
rs62056921 | 1.00[ASN][1000 genomes] |
rs62056922 | 1.00[ASN][1000 genomes] |
rs62056925 | 1.00[ASN][1000 genomes] |
rs62056926 | 1.00[ASN][1000 genomes] |
rs62056927 | 1.00[ASN][1000 genomes] |
rs62056928 | 1.00[ASN][1000 genomes] |
rs62056929 | 1.00[ASN][1000 genomes] |
rs62056930 | 1.00[ASN][1000 genomes] |
rs62056931 | 1.00[ASN][1000 genomes] |
rs62056932 | 1.00[ASN][1000 genomes] |
rs62056933 | 1.00[ASN][1000 genomes] |
rs62056934 | 1.00[ASN][1000 genomes] |
rs62056935 | 1.00[ASN][1000 genomes] |
rs62056936 | 1.00[ASN][1000 genomes] |
rs62056937 | 1.00[ASN][1000 genomes] |
rs62056939 | 1.00[ASN][1000 genomes] |
rs62056940 | 1.00[ASN][1000 genomes] |
rs62056946 | 1.00[ASN][1000 genomes] |
rs62064364 | 1.00[ASN][1000 genomes] |
rs62064597 | 0.80[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs62064598 | 1.00[ASN][1000 genomes] |
rs62064600 | 1.00[ASN][1000 genomes] |
rs62064603 | 1.00[ASN][1000 genomes] |
rs62064637 | 1.00[ASN][1000 genomes] |
rs62064641 | 1.00[ASN][1000 genomes] |
rs62064643 | 0.84[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs62064645 | 0.84[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs62064647 | 1.00[ASN][1000 genomes] |
rs62064649 | 1.00[ASN][1000 genomes] |
rs62064651 | 0.91[AFR][1000 genomes];0.84[AMR][1000 genomes] |
rs62064653 | 0.80[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs62064654 | 0.84[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs62064655 | 0.82[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs62064657 | 0.84[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs62065374 | 0.84[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs62065376 | 0.81[AFR][1000 genomes];0.84[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs62065377 | 0.82[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs62065378 | 0.82[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs62065379 | 0.84[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs62065380 | 0.84[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs62065385 | 0.84[AMR][1000 genomes];0.80[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs62065389 | 0.86[AMR][1000 genomes];0.80[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs62065391 | 0.84[AMR][1000 genomes];0.80[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs62065392 | 0.84[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs62065399 | 0.87[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs62065403 | 1.00[ASN][1000 genomes] |
rs62065404 | 1.00[ASN][1000 genomes] |
rs62065436 | 0.80[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs62065437 | 1.00[ASN][1000 genomes] |
rs62065438 | 0.80[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs62065441 | 0.87[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs62065442 | 1.00[ASN][1000 genomes] |
rs62065444 | 0.84[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs62065445 | 1.00[ASN][1000 genomes] |
rs62065447 | 1.00[ASN][1000 genomes] |
rs62065448 | 1.00[ASN][1000 genomes] |
rs62065449 | 1.00[ASN][1000 genomes] |
rs62065450 | 0.81[AMR][1000 genomes] |
rs62065452 | 1.00[ASN][1000 genomes] |
rs62065453 | 0.83[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs62065459 | 1.00[ASN][1000 genomes] |
rs62066128 | 1.00[ASN][1000 genomes] |
rs62066460 | 1.00[ASN][1000 genomes] |
rs71238846 | 1.00[ASN][1000 genomes] |
rs71373560 | 1.00[ASN][1000 genomes] |
rs71373572 | 0.82[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs7209501 | 1.00[ASN][1000 genomes] |
rs7220206 | 0.82[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs7222389 | 1.00[ASN][1000 genomes] |
rs7222444 | 0.86[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs73984391 | 1.00[ASN][1000 genomes] |
rs7502718 | 1.00[ASN][1000 genomes] |
rs7502937 | 1.00[ASN][1000 genomes] |
rs9730 | 0.82[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs9906974 | 1.00[ASN][1000 genomes] |
No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv431632 | chr17:43199763-43733983 | Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' Active TSS Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site | 210 gene(s) | inside rSNPs | diseases |
2 | nsv431633 | chr17:43199763-43772540 | Enhancers Flanking Active TSS Strong transcription Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Weak transcription Active TSS ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site | 210 gene(s) | inside rSNPs | diseases |
3 | nsv431634 | chr17:43346980-43659975 | Weak transcription Active TSS Enhancers Genic enhancers Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site | 56 gene(s) | inside rSNPs | diseases |
4 | nsv431636 | chr17:43403005-43659881 | Active TSS Genic enhancers Enhancers Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats Flanking Active TSS | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site | 39 gene(s) | inside rSNPs | diseases |
5 | esv2754858 | chr17:43403005-43666906 | Weak transcription Flanking Bivalent TSS/Enh Enhancers Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS Bivalent Enhancer Active TSS Strong transcription ZNF genes & repeats Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site | 44 gene(s) | inside rSNPs | diseases |
6 | nsv431637 | chr17:43403005-43716885 | Genic enhancers Strong transcription Enhancers Flanking Active TSS Weak transcription Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site | 49 gene(s) | inside rSNPs | diseases |
7 | nsv428342 | chr17:43443554-43651084 | Weak transcription Enhancers Flanking Active TSS Bivalent/Poised TSS Active TSS Strong transcription Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site | 32 gene(s) | inside rSNPs | diseases |
8 | esv2757659 | chr17:43457886-43733983 | Enhancers Flanking Active TSS Genic enhancers Strong transcription Active TSS Weak transcription Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site | 45 gene(s) | inside rSNPs | diseases |
9 | esv2758691 | chr17:43457886-43816023 | Enhancers Flanking Active TSS Genic enhancers Active TSS Weak transcription Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site | 47 gene(s) | inside rSNPs | diseases |
10 | esv2755280 | chr17:43459697-43666906 | Strong transcription Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Enhancers Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site | 40 gene(s) | inside rSNPs | diseases |
11 | nsv1065930 | chr17:43467291-44151468 | Weak transcription Active TSS Bivalent/Poised TSS Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site | 51 gene(s) | inside rSNPs | diseases |
12 | nsv431638 | chr17:43470156-43693538 | Strong transcription Enhancers Weak transcription Active TSS Bivalent Enhancer Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site | 41 gene(s) | inside rSNPs | diseases |
13 | esv2755741 | chr17:43470760-43655688 | Bivalent/Poised TSS Strong transcription Weak transcription Flanking Active TSS Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site | 32 gene(s) | inside rSNPs | diseases |
14 | nsv431639 | chr17:43470760-43659355 | Bivalent Enhancer Enhancers Weak transcription Genic enhancers Active TSS Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site | 32 gene(s) | inside rSNPs | diseases |
15 | esv2754089 | chr17:43470760-43659881 | Enhancers Weak transcription Active TSS Genic enhancers Strong transcription Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site | 33 gene(s) | inside rSNPs | diseases |
16 | esv34266 | chr17:43470760-43659975 | Enhancers Weak transcription Active TSS Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Active TSS ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site | 33 gene(s) | inside rSNPs | diseases |
17 | esv34577 | chr17:43470760-43659975 | Genic enhancers Weak transcription Bivalent/Poised TSS Strong transcription Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site | 33 gene(s) | inside rSNPs | diseases |
18 | esv2752564 | chr17:43470760-43659975 | Weak transcription Genic enhancers Strong transcription Enhancers Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site | 33 gene(s) | inside rSNPs | diseases |
19 | esv2753343 | chr17:43470760-43659975 | Enhancers Bivalent Enhancer Strong transcription Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site | 33 gene(s) | inside rSNPs | diseases |
20 | esv2753852 | chr17:43470760-43659975 | Active TSS Strong transcription Flanking Bivalent TSS/Enh Weak transcription Enhancers Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site | 33 gene(s) | inside rSNPs | diseases |
21 | esv2754692 | chr17:43470760-43659975 | Weak transcription Flanking Active TSS Enhancers Bivalent Enhancer Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site | 33 gene(s) | inside rSNPs | diseases |
22 | esv2754773 | chr17:43470760-43659975 | Strong transcription Bivalent Enhancer Enhancers Genic enhancers Weak transcription Flanking Active TSS Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site | 33 gene(s) | inside rSNPs | diseases |
23 | esv2754821 | chr17:43470760-43659975 | Genic enhancers Strong transcription Enhancers Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site | 33 gene(s) | inside rSNPs | diseases |
24 | esv2755261 | chr17:43470760-43659975 | Flanking Bivalent TSS/Enh Weak transcription Enhancers Genic enhancers Strong transcription Flanking Active TSS Bivalent Enhancer Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site | 33 gene(s) | inside rSNPs | diseases |
25 | esv2755434 | chr17:43470760-43659975 | Strong transcription Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site | 33 gene(s) | inside rSNPs | diseases |
26 | esv2755618 | chr17:43470760-43659975 | Enhancers Flanking Active TSS Weak transcription Strong transcription Active TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site | 33 gene(s) | inside rSNPs | diseases |
27 | esv2756206 | chr17:43470760-43659975 | Flanking Active TSS Weak transcription Enhancers Active TSS Strong transcription Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site | 33 gene(s) | inside rSNPs | diseases |
28 | esv2756211 | chr17:43470760-43659975 | Bivalent/Poised TSS Active TSS Strong transcription Flanking Active TSS Enhancers Weak transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site | 33 gene(s) | inside rSNPs | diseases |
29 | esv2756238 | chr17:43470760-43659975 | Weak transcription Strong transcription Genic enhancers Enhancers Bivalent Enhancer Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site | 33 gene(s) | inside rSNPs | diseases |
30 | esv2756640 | chr17:43470760-43659975 | Flanking Active TSS Genic enhancers Strong transcription Weak transcription Enhancers Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site | 33 gene(s) | inside rSNPs | diseases |
31 | esv34307 | chr17:43470760-43666906 | Enhancers Genic enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Strong transcription Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site | 38 gene(s) | inside rSNPs | diseases |
32 | esv2755466 | chr17:43470760-43666906 | Enhancers Flanking Active TSS Active TSS Weak transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site | 38 gene(s) | inside rSNPs | diseases |
33 | esv2756448 | chr17:43470760-43666906 | Weak transcription Strong transcription Enhancers Flanking Active TSS Bivalent Enhancer Active TSS Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site | 38 gene(s) | inside rSNPs | diseases |
34 | nsv431640 | chr17:43470760-43666906 | Weak transcription Enhancers Active TSS Genic enhancers Flanking Bivalent TSS/Enh Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site | 38 gene(s) | inside rSNPs | diseases |
35 | esv2753768 | chr17:43470760-43734304 | Weak transcription Enhancers Flanking Bivalent TSS/Enh Strong transcription Flanking Active TSS Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site | 43 gene(s) | inside rSNPs | diseases |
36 | esv2754725 | chr17:43470760-43741452 | Flanking Active TSS Strong transcription Enhancers Genic enhancers Weak transcription Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site | 43 gene(s) | inside rSNPs | diseases |
37 | esv2752397 | chr17:43485791-43659975 | Enhancers Strong transcription Weak transcription Flanking Active TSS Bivalent Enhancer Genic enhancers Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site | 31 gene(s) | inside rSNPs | diseases |
38 | esv2753431 | chr17:43485791-43659975 | Weak transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer Genic enhancers Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site | 31 gene(s) | inside rSNPs | diseases |
39 | esv2755266 | chr17:43485791-43659975 | Weak transcription Flanking Active TSS Enhancers Strong transcription Active TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site | 31 gene(s) | inside rSNPs | diseases |
40 | esv2755477 | chr17:43485791-43659975 | Enhancers Strong transcription Weak transcription Bivalent/Poised TSS Active TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site | 31 gene(s) | inside rSNPs | diseases |
41 | esv2755480 | chr17:43485791-43659975 | Weak transcription Strong transcription Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Enhancers Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site | 31 gene(s) | inside rSNPs | diseases |
42 | esv2756392 | chr17:43485791-43659975 | Enhancers Genic enhancers Weak transcription Active TSS Flanking Active TSS Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site | 31 gene(s) | inside rSNPs | diseases |
43 | nsv431641 | chr17:43485791-43659975 | Enhancers Bivalent/Poised TSS Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS Genic enhancers Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site | 31 gene(s) | inside rSNPs | diseases |
44 | esv35084 | chr17:43485791-43666906 | Flanking Bivalent TSS/Enh Weak transcription Active TSS Enhancers Bivalent/Poised TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS Bivalent Enhancer ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site | 36 gene(s) | inside rSNPs | diseases |
45 | esv2754833 | chr17:43485791-43666906 | Transcr. at gene 5' and 3' Active TSS Flanking Active TSS Bivalent Enhancer Enhancers Weak transcription Flanking Bivalent TSS/Enh Strong transcription Genic enhancers Bivalent/Poised TSS ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site | 36 gene(s) | inside rSNPs | diseases |
46 | nsv431643 | chr17:43485791-43666906 | Enhancers Bivalent/Poised TSS Strong transcription Active TSS Weak transcription Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site | 36 gene(s) | inside rSNPs | diseases |
47 | nsv431642 | chr17:43485791-43716885 | Strong transcription Active TSS Weak transcription Enhancers Flanking Active TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site | 41 gene(s) | inside rSNPs | diseases |
48 | nsv431644 | chr17:43516402-43651511 | Enhancers Weak transcription Strong transcription Flanking Active TSS Active TSS Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site | 11 gene(s) | inside rSNPs | diseases |
49 | nsv431645 | chr17:43516402-43666906 | Flanking Active TSS Enhancers Weak transcription Active TSS Strong transcription Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site | 20 gene(s) | inside rSNPs | diseases |
50 | esv2753034 | chr17:43516402-43693538 | Weak transcription Active TSS Enhancers Strong transcription Flanking Active TSS Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site | 23 gene(s) | inside rSNPs | diseases |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr17:43510200-43548200 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
2 | chr17:43510800-43567200 | Weak transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
3 | chr17:43515600-43549600 | Weak transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
4 | chr17:43517000-43549800 | Weak transcription | Left Ventricle | heart |
5 | chr17:43518000-43552600 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
6 | chr17:43518200-43548600 | Weak transcription | Fetal Kidney | kidney |
7 | chr17:43518200-43552200 | Weak transcription | Rectal Smooth Muscle | rectum |
8 | chr17:43518400-43549600 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
9 | chr17:43519600-43564600 | Weak transcription | HSMMtube | muscle |
10 | chr17:43523000-43567200 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
11 | chr17:43523800-43546400 | Weak transcription | Pancreas | Pancrea |
12 | chr17:43523800-43560000 | Weak transcription | NHDF-Ad | bronchial |
13 | chr17:43524400-43567000 | Weak transcription | Primary T killer memory cells from peripheral blood | blood |
14 | chr17:43527600-43556800 | Weak transcription | Fetal Lung | lung |
15 | chr17:43527800-43546000 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
16 | chr17:43528000-43544800 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
17 | chr17:43528200-43545200 | Weak transcription | Primary T cells from cord blood | blood |
18 | chr17:43529000-43541400 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
19 | chr17:43529000-43560000 | Weak transcription | Primary hematopoietic stem cells | blood |
20 | chr17:43529000-43566600 | Weak transcription | Colon Smooth Muscle | Colon |
21 | chr17:43530800-43545400 | Weak transcription | Dnd41 | blood |
22 | chr17:43531400-43550000 | Weak transcription | Primary T cells effector/memory enriched fromperipheralblood | blood |
23 | chr17:43531600-43540000 | Weak transcription | Colonic Mucosa | Colon |
24 | chr17:43531600-43551800 | Weak transcription | Placenta Amnion | Placenta Amnion |
25 | chr17:43531600-43552400 | Weak transcription | Aorta | Aorta |
26 | chr17:43531800-43540600 | Weak transcription | Fetal Intestine Large | intestine |
27 | chr17:43532000-43545400 | Weak transcription | Fetal Muscle Trunk | muscle |
28 | chr17:43532000-43549800 | Weak transcription | Primary T helper cells PMA-I stimulated | -- |
29 | chr17:43532000-43552400 | Weak transcription | Right Ventricle | heart |
30 | chr17:43533400-43545400 | Weak transcription | Esophagus | oesophagus |
31 | chr17:43533800-43545400 | Weak transcription | Liver | Liver |
32 | chr17:43533800-43553800 | Weak transcription | Fetal Brain Female | brain |
33 | chr17:43534000-43545200 | Weak transcription | Ovary | ovary |
34 | chr17:43534000-43545400 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
35 | chr17:43534000-43545400 | Weak transcription | Brain Substantia Nigra | brain |
36 | chr17:43534000-43545400 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
37 | chr17:43534000-43545600 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
38 | chr17:43534000-43545600 | Weak transcription | Brain Anterior Caudate | brain |
39 | chr17:43534000-43545600 | Weak transcription | Gastric | stomach |
40 | chr17:43534000-43552200 | Weak transcription | Brain Hippocampus Middle | brain |
41 | chr17:43534000-43554200 | Weak transcription | Brain Germinal Matrix | brain |
42 | chr17:43534000-43559000 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
43 | chr17:43534200-43539800 | Weak transcription | Primary T helper 17 cells PMA-I stimulated | -- |
44 | chr17:43534200-43541600 | Weak transcription | Primary T helper cells fromperipheralblood | blood |
45 | chr17:43534200-43544800 | Weak transcription | Brain Cingulate Gyrus | brain |
46 | chr17:43534200-43544800 | Weak transcription | Thymus | Thymus |
47 | chr17:43534200-43545400 | Weak transcription | Duodenum Mucosa | Duodenum |
48 | chr17:43534200-43549600 | Weak transcription | Brain Inferior Temporal Lobe | brain |
49 | chr17:43534200-43549800 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
50 | chr17:43534200-43552400 | Weak transcription | Brain Angular Gyrus | brain |