The 2.0 version of rSNPBase

Variant report

Variant rs62113305
Chromosome Location chr2:11885692-11885693
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:121 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:11882400-11886200 Enhancers NHDF-Ad bronchial
2 chr2:11882600-11886800 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr2:11882800-11886000 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
4 chr2:11882800-11886200 Enhancers Primary hematopoietic stem cells short term culture blood
5 chr2:11882800-11886400 Enhancers Fetal Thymus thymus
6 chr2:11882800-11886600 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
7 chr2:11883000-11886200 Enhancers Fetal Muscle Leg muscle
8 chr2:11883200-11886000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
9 chr2:11883400-11886200 Enhancers Fetal Intestine Large intestine
10 chr2:11883400-11886200 Enhancers Fetal Intestine Small intestine
11 chr2:11883400-11886400 Enhancers Fetal Heart heart
12 chr2:11883400-11886400 Enhancers Stomach Mucosa stomach
13 chr2:11883400-11887000 Enhancers Placenta Placenta
14 chr2:11883600-11885800 Enhancers Breast Myoepithelial Primary Cells Breast
15 chr2:11883600-11886200 Enhancers Primary T helper cells PMA-I stimulated --
16 chr2:11883600-11886200 Enhancers Primary Natural Killer cells fromperipheralblood blood
17 chr2:11883600-11886200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
18 chr2:11883600-11886400 Enhancers Primary B cells from peripheral blood blood
19 chr2:11883600-11886400 Enhancers Ovary ovary
20 chr2:11883600-11886400 Enhancers Sigmoid Colon Sigmoid Colon
21 chr2:11883600-11886800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
22 chr2:11883800-11886000 Enhancers Brain Angular Gyrus brain
23 chr2:11883800-11886200 Enhancers Primary T helper naive cells fromperipheralblood blood
24 chr2:11883800-11886200 Enhancers Primary T killer naive cells fromperipheralblood blood
25 chr2:11883800-11886200 Enhancers Colon Smooth Muscle Colon
26 chr2:11883800-11886200 Enhancers Right Ventricle heart
27 chr2:11883800-11886400 Enhancers Primary monocytes fromperipheralblood blood
28 chr2:11883800-11886400 Enhancers Primary T killer memory cells from peripheral blood blood
29 chr2:11883800-11886400 Enhancers Left Ventricle heart
30 chr2:11883800-11886800 Enhancers Lung lung
31 chr2:11883800-11886800 Enhancers Spleen Spleen
32 chr2:11884000-11886200 Enhancers Primary hematopoietic stem cells blood
33 chr2:11884000-11886200 Enhancers Primary T helper cells fromperipheralblood blood
34 chr2:11884200-11886200 Enhancers Primary B cells from cord blood blood
35 chr2:11884400-11886200 Enhancers HUES64 Cell Line embryonic stem cell
36 chr2:11884400-11886200 Enhancers Liver Liver
37 chr2:11884400-11886200 Enhancers Fetal Lung lung
38 chr2:11884400-11886600 Enhancers Small Intestine intestine
39 chr2:11884600-11886200 Enhancers Primary T cells fromperipheralblood blood
40 chr2:11884600-11886200 Enhancers Brain Substantia Nigra brain
41 chr2:11884600-11886200 Weak transcription Pancreatic Islets Pancreatic Islet
42 chr2:11884600-11886200 Enhancers Right Atrium heart
43 chr2:11884600-11886800 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
44 chr2:11884800-11886000 Enhancers Brain Dorsolateral Prefrontal Cortex brain
45 chr2:11884800-11886000 Weak transcription Colonic Mucosa Colon
46 chr2:11884800-11886000 Enhancers GM12878-XiMat blood
47 chr2:11884800-11886000 Enhancers NHEK skin
48 chr2:11884800-11886200 Enhancers Primary T helper memory cells from peripheral blood 1 blood
49 chr2:11884800-11886200 Enhancers Primary T regulatory cells fromperipheralblood blood
50 chr2:11884800-11886200 Enhancers Adipose Nuclei Adipose

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Last update: Aug 31, 2015