The 2.0 version of rSNPBase

Variant report

Variant rs62113307
Chromosome Location chr2:11886952-11886953
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:11883400-11887000 Enhancers Placenta Placenta
2 chr2:11886000-11887400 Active TSS H9 Cell Line embryonic stem cell
3 chr2:11886000-11887400 Bivalent/Poised TSS iPS-20b Cell Line embryonic stem cell
4 chr2:11886000-11888000 Active TSS Brain Germinal Matrix brain
5 chr2:11886200-11887400 Bivalent/Poised TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
6 chr2:11886200-11887400 Active TSS iPS-15b Cell Line embryonic stem cell
7 chr2:11886200-11887400 Active TSS Fetal Kidney kidney
8 chr2:11886200-11887800 Active TSS HSMM muscle
9 chr2:11886200-11888400 Active TSS Pancreatic Islets Pancreatic Islet
10 chr2:11886200-11888600 Active TSS ES-I3 Cell Line embryonic stem cell
11 chr2:11886400-11887000 Active TSS ES-UCSF4 Cell Line embryonic stem cell
12 chr2:11886400-11887000 Bivalent/Poised TSS Primary neutrophils fromperipheralblood blood
13 chr2:11886400-11887000 Active TSS Primary mononuclear cells fromperipheralblood Blood
14 chr2:11886400-11887200 Active TSS Primary T helper memory cells from peripheral blood 1 blood
15 chr2:11886400-11887400 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
16 chr2:11886400-11887400 Active TSS Primary T killer naive cells fromperipheralblood blood
17 chr2:11886400-11887400 Active TSS Colonic Mucosa Colon
18 chr2:11886400-11887400 Active TSS Fetal Brain Female brain
19 chr2:11886400-11887600 Active TSS iPS DF 19.11 Cell Line embryonic stem cell
20 chr2:11886400-11887600 Active TSS Primary T helper naive cells from peripheral blood blood
21 chr2:11886400-11887800 Active TSS Breast Myoepithelial Primary Cells Breast
22 chr2:11886400-11888000 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
23 chr2:11886400-11888000 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
24 chr2:11886400-11888000 Active TSS HSMMtube muscle
25 chr2:11886600-11887000 Enhancers Primary B cells from cord blood blood
26 chr2:11886600-11887000 Active TSS Primary B cells from peripheral blood blood
27 chr2:11886600-11887000 Active TSS Primary hematopoietic stem cells short term culture blood
28 chr2:11886600-11887000 Active TSS Primary T helper 17 cells PMA-I stimulated --
29 chr2:11886600-11887000 Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
30 chr2:11886600-11887000 Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
31 chr2:11886600-11887000 Active TSS Cortex derived primary cultured neurospheres brain
32 chr2:11886600-11887000 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
33 chr2:11886600-11887000 Active TSS Skeletal Muscle Female skeletal muscle
34 chr2:11886600-11887000 Active TSS Monocytes-CD14+_RO01746 blood
35 chr2:11886600-11887200 Active TSS H1 Cell Line embryonic stem cell
36 chr2:11886600-11887200 Active TSS H1 Derived Mesenchymal Stem Cells ES cell derived
37 chr2:11886600-11887200 Active TSS HUES64 Cell Line embryonic stem cell
38 chr2:11886600-11887200 Active TSS Primary monocytes fromperipheralblood blood
39 chr2:11886600-11887200 Active TSS Primary T cells fromperipheralblood blood
40 chr2:11886600-11887200 Active TSS Primary T helper cells fromperipheralblood blood
41 chr2:11886600-11887200 Active TSS Primary T regulatory cells fromperipheralblood blood
42 chr2:11886600-11887200 Active TSS Primary Natural Killer cells fromperipheralblood blood
43 chr2:11886600-11887200 Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
44 chr2:11886600-11887200 Active TSS Muscle Satellite Cultured Cells --
45 chr2:11886600-11887200 Active TSS Adipose Nuclei Adipose
46 chr2:11886600-11887200 Active TSS Liver Liver
47 chr2:11886600-11887200 Active TSS Brain Inferior Temporal Lobe brain
48 chr2:11886600-11887200 Active TSS Duodenum Mucosa Duodenum
49 chr2:11886600-11887200 Active TSS Fetal Adrenal Gland Adrenal Gland
50 chr2:11886600-11887200 Weak transcription Fetal Brain Male brain

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Last update: Aug 31, 2015