The 2.0 version of rSNPBase

Variant report

Variant rs62117255
Chromosome Location chr19:53097705-53097706
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:114 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:53074600-53103600 Weak transcription Fetal Brain Male brain
2 chr19:53087400-53103600 Weak transcription Brain Substantia Nigra brain
3 chr19:53087600-53099000 Weak transcription iPS-18 Cell Line embryonic stem cell
4 chr19:53087600-53099000 Weak transcription Skeletal Muscle Male skeletal muscle
5 chr19:53087600-53099000 Weak transcription NHDF-Ad bronchial
6 chr19:53087600-53099400 Weak transcription Brain Angular Gyrus brain
7 chr19:53087600-53103600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
8 chr19:53087800-53098800 Weak transcription HSMMtube muscle
9 chr19:53088200-53099000 Weak transcription H9 Cell Line embryonic stem cell
10 chr19:53088400-53099000 Weak transcription HUVEC blood vessel
11 chr19:53088400-53103600 Weak transcription Psoas Muscle Psoas
12 chr19:53088600-53099200 Weak transcription Rectal Smooth Muscle rectum
13 chr19:53088800-53098800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
14 chr19:53088800-53099000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
15 chr19:53088800-53099000 Weak transcription Left Ventricle heart
16 chr19:53088800-53099000 Weak transcription Placenta Amnion Placenta Amnion
17 chr19:53088800-53103600 Weak transcription Colon Smooth Muscle Colon
18 chr19:53088800-53103600 Weak transcription Right Ventricle heart
19 chr19:53088800-53103800 Weak transcription Right Atrium heart
20 chr19:53089000-53103800 Weak transcription ES-WA7 Cell Line embryonic stem cell
21 chr19:53089200-53099000 Weak transcription ES-I3 Cell Line embryonic stem cell
22 chr19:53089200-53099000 Weak transcription iPS-15b Cell Line embryonic stem cell
23 chr19:53089400-53099400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
24 chr19:53089800-53100000 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
25 chr19:53090200-53099000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
26 chr19:53090800-53099000 Weak transcription Primary T helper cells fromperipheralblood blood
27 chr19:53090800-53100000 Weak transcription Fetal Brain Female brain
28 chr19:53091000-53104200 Weak transcription Spleen Spleen
29 chr19:53091200-53099200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
30 chr19:53091200-53099400 Weak transcription Primary T killer naive cells fromperipheralblood blood
31 chr19:53091600-53099400 Weak transcription HSMM muscle
32 chr19:53092200-53103600 Weak transcription Gastric stomach
33 chr19:53093600-53097800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
34 chr19:53093800-53099000 Weak transcription Primary T helper naive cells fromperipheralblood blood
35 chr19:53094000-53099400 Weak transcription Brain Germinal Matrix brain
36 chr19:53094000-53103800 Weak transcription Aorta Aorta
37 chr19:53094200-53099400 Weak transcription Cortex derived primary cultured neurospheres brain
38 chr19:53094400-53098000 Weak transcription Small Intestine intestine
39 chr19:53095000-53103400 Weak transcription Fetal Heart heart
40 chr19:53095200-53099800 Weak transcription Primary T helper naive cells from peripheral blood blood
41 chr19:53095400-53099000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
42 chr19:53095600-53098000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
43 chr19:53095600-53098000 Weak transcription Colonic Mucosa Colon
44 chr19:53095600-53099200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
45 chr19:53095600-53099800 Weak transcription NHLF lung
46 chr19:53095800-53098000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
47 chr19:53095800-53098000 Weak transcription Primary T helper cells PMA-I stimulated --
48 chr19:53095800-53098000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
49 chr19:53095800-53098400 Weak transcription Duodenum Smooth Muscle Duodenum
50 chr19:53095800-53099000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived

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Last update: Aug 31, 2015