Variant report

Variant	rs621200
Chromosome Location	chr3:23048483-23048484
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs506284	0.81[AFR][1000 genomes];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs520582	0.87[EUR][1000 genomes]
rs528649	0.90[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs529219	0.87[EUR][1000 genomes]
rs535689	0.82[AMR][1000 genomes];0.89[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs537660	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs549968	0.89[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs55652823	0.89[EUR][1000 genomes]
rs601598	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs633464	0.88[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs711725	0.86[AMR][1000 genomes];0.98[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs822768	0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs822775	0.84[AMR][1000 genomes];0.86[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs843989	0.80[EUR][1000 genomes]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:23045200-23052200	Weak transcription	Fetal Heart	heart
2	chr3:23045400-23048600	Weak transcription	HUVEC	blood vessel
3	chr3:23047200-23049200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
4	chr3:23047400-23049000	Weak transcription	Muscle Satellite Cultured Cells	--
5	chr3:23047400-23049200	Weak transcription	NHEK	skin
6	chr3:23047400-23049600	Weak transcription	HMEC	breast

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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