Variant report

Variant	rs62120842
Chromosome Location	chr2:21196447-21196448
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 21 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs10495712	0.96[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13392272	0.93[ASN][1000 genomes]
rs17397667	0.90[AFR][1000 genomes];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2337381	0.90[AFR][1000 genomes];0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34059329	0.81[AFR][1000 genomes]
rs35131127	0.86[AFR][1000 genomes]
rs4665788	0.88[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs55938327	0.86[AMR][1000 genomes];0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56142315	0.92[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56327713	0.89[AFR][1000 genomes]
rs62120837	0.84[AFR][1000 genomes];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62120838	0.82[AFR][1000 genomes];0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62120843	0.96[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62120847	0.92[AFR][1000 genomes];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62120852	0.86[AMR][1000 genomes];0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62122481	0.93[ASN][1000 genomes]
rs6721844	0.87[AFR][1000 genomes]
rs68093099	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs693	0.83[ASN][1000 genomes]
rs938848	0.84[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs952275	0.90[ASN][1000 genomes]

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:21195000-21196800	Enhancers	Fetal Stomach	stomach
2	chr2:21195000-21196800	Enhancers	Rectal Smooth Muscle	rectum
3	chr2:21195000-21197000	Enhancers	Aorta	Aorta
4	chr2:21195000-21197000	Enhancers	Colon Smooth Muscle	Colon
5	chr2:21195000-21197000	Enhancers	Ovary	ovary
6	chr2:21195000-21201000	Enhancers	Stomach Smooth Muscle	stomach
7	chr2:21195200-21199200	Weak transcription	Lung	lung
8	chr2:21195200-21199400	Weak transcription	Gastric	stomach
9	chr2:21195400-21196800	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
10	chr2:21195600-21197000	Enhancers	Breast Myoepithelial Primary Cells	Breast
11	chr2:21195600-21200600	Weak transcription	Fetal Kidney	kidney

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