The 2.0 version of rSNPBase

Variant report

Variant rs62157555
Chromosome Location chr2:128107176-128107177
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:78 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:128059400-128109600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr2:128069000-128117000 Weak transcription Small Intestine intestine
3 chr2:128072200-128109600 Weak transcription Esophagus oesophagus
4 chr2:128072200-128111800 Weak transcription K562 blood
5 chr2:128072600-128112000 Weak transcription NHEK skin
6 chr2:128077000-128116200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
7 chr2:128077200-128122800 Weak transcription Aorta Aorta
8 chr2:128078600-128109600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
9 chr2:128079400-128107800 Weak transcription Brain Inferior Temporal Lobe brain
10 chr2:128079800-128107600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
11 chr2:128079800-128114600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
12 chr2:128082000-128114600 Weak transcription Cortex derived primary cultured neurospheres brain
13 chr2:128083600-128117000 Weak transcription Brain Anterior Caudate brain
14 chr2:128086600-128112000 Weak transcription Primary T killer memory cells from peripheral blood blood
15 chr2:128088800-128109400 Weak transcription Right Ventricle heart
16 chr2:128090800-128112000 Weak transcription Rectal Smooth Muscle rectum
17 chr2:128092600-128109400 Weak transcription Lung lung
18 chr2:128092600-128122000 Weak transcription Pancreas Pancrea
19 chr2:128092800-128109600 Weak transcription Fetal Adrenal Gland Adrenal Gland
20 chr2:128093200-128122800 Weak transcription Fetal Kidney kidney
21 chr2:128093400-128107400 Weak transcription Primary T helper naive cells from peripheral blood blood
22 chr2:128095600-128122000 Weak transcription Brain Angular Gyrus brain
23 chr2:128096400-128109000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
24 chr2:128096400-128109400 Weak transcription Ovary ovary
25 chr2:128096400-128112000 Weak transcription Brain Hippocampus Middle brain
26 chr2:128096400-128122200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
27 chr2:128096800-128117800 Weak transcription Duodenum Mucosa Duodenum
28 chr2:128096800-128119600 Weak transcription HSMM muscle
29 chr2:128099000-128109400 Weak transcription Right Atrium heart
30 chr2:128100000-128112000 Weak transcription Fetal Lung lung
31 chr2:128100200-128109600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
32 chr2:128100200-128110000 Weak transcription Fetal Intestine Large intestine
33 chr2:128100200-128119600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
34 chr2:128100400-128109400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
35 chr2:128100400-128109400 Weak transcription Primary T cells fromperipheralblood blood
36 chr2:128100400-128118400 Weak transcription Rectal Mucosa Donor 31 rectum
37 chr2:128100600-128119800 Weak transcription NHDF-Ad bronchial
38 chr2:128101600-128116400 Weak transcription Fetal Thymus thymus
39 chr2:128101600-128117800 Weak transcription Rectal Mucosa Donor 29 rectum
40 chr2:128102600-128109400 Weak transcription Left Ventricle heart
41 chr2:128102600-128122400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
42 chr2:128102800-128109400 Weak transcription Fetal Intestine Small intestine
43 chr2:128103600-128109800 Enhancers Primary T helper cells PMA-I stimulated --
44 chr2:128103800-128108600 Weak transcription Liver Liver
45 chr2:128103800-128111800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
46 chr2:128104400-128109000 Enhancers Primary T helper cells fromperipheralblood blood
47 chr2:128104600-128119400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
48 chr2:128105400-128108000 Enhancers Primary B cells from peripheral blood blood
49 chr2:128105400-128109800 Enhancers Primary neutrophils fromperipheralblood blood
50 chr2:128105600-128109200 Weak transcription HepG2 liver

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Last update: Aug 31, 2015