The 2.0 version of rSNPBase

Variant report

Variant rs62180079
Chromosome Location chr2:181851899-181851900
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:106 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:181846400-181859200 Weak transcription Esophagus oesophagus
2 chr2:181846400-181868600 Weak transcription Gastric stomach
3 chr2:181846600-181852600 Weak transcription Sigmoid Colon Sigmoid Colon
4 chr2:181846600-181872400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
5 chr2:181847000-181855000 Weak transcription Primary T cells fromperipheralblood blood
6 chr2:181847000-181856400 Weak transcription H9 Cell Line embryonic stem cell
7 chr2:181847000-181857600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr2:181847000-181858800 Weak transcription Colonic Mucosa Colon
9 chr2:181847000-181859200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
10 chr2:181847000-181862400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
11 chr2:181847000-181862800 Weak transcription Placenta Placenta
12 chr2:181847000-181870000 Weak transcription Pancreas Pancrea
13 chr2:181847000-181873200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
14 chr2:181847200-181858800 Weak transcription Primary neutrophils fromperipheralblood blood
15 chr2:181847400-181870000 Weak transcription Right Ventricle heart
16 chr2:181847600-181864200 Weak transcription Primary T regulatory cells fromperipheralblood blood
17 chr2:181847600-181868400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
18 chr2:181847800-181854400 Weak transcription Primary monocytes fromperipheralblood blood
19 chr2:181848800-181856200 Weak transcription Psoas Muscle Psoas
20 chr2:181848800-181856400 Weak transcription Ovary ovary
21 chr2:181849000-181852200 Weak transcription H1 Cell Line embryonic stem cell
22 chr2:181849000-181856200 Weak transcription Aorta Aorta
23 chr2:181849000-181856200 Weak transcription Fetal Muscle Trunk muscle
24 chr2:181849000-181862000 Weak transcription Primary B cells from peripheral blood blood
25 chr2:181849000-181872800 Weak transcription Fetal Intestine Large intestine
26 chr2:181849200-181854600 Weak transcription Adipose Nuclei Adipose
27 chr2:181849200-181855800 Weak transcription Primary B cells from cord blood blood
28 chr2:181849200-181860000 Weak transcription Fetal Intestine Small intestine
29 chr2:181849400-181854400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
30 chr2:181849400-181854800 Weak transcription Breast Myoepithelial Primary Cells Breast
31 chr2:181849400-181855200 Weak transcription Primary hematopoietic stem cells short term culture blood
32 chr2:181849400-181880000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
33 chr2:181849600-181855400 Weak transcription Rectal Mucosa Donor 29 rectum
34 chr2:181849800-181854600 Weak transcription Monocytes-CD14+_RO01746 blood
35 chr2:181849800-181855000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
36 chr2:181850000-181853800 Weak transcription Primary hematopoietic stem cells blood
37 chr2:181850000-181854000 Weak transcription Primary T killer naive cells fromperipheralblood blood
38 chr2:181850000-181855200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
39 chr2:181850000-181856200 Weak transcription Fetal Stomach stomach
40 chr2:181850000-181873000 Weak transcription Rectal Mucosa Donor 31 rectum
41 chr2:181850200-181853000 Enhancers HUES48 Cell Line embryonic stem cell
42 chr2:181850200-181854800 Weak transcription Fetal Muscle Leg muscle
43 chr2:181850200-181854800 Weak transcription HUVEC blood vessel
44 chr2:181850400-181853200 Enhancers iPS-15b Cell Line embryonic stem cell
45 chr2:181850400-181854600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
46 chr2:181850600-181852600 Strong transcription HSMM muscle
47 chr2:181850600-181854400 Enhancers Pancreatic Islets Pancreatic Islet
48 chr2:181850800-181853000 Enhancers iPS-18 Cell Line embryonic stem cell
49 chr2:181850800-181853400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
50 chr2:181850800-181854200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast

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Last update: Aug 31, 2015