Variant report

Variant	rs62230297
Chromosome Location	chr3:25161792-25161793
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs34155045	0.94[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs41441147	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs41530749	0.94[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs56023574	0.98[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs56098835	0.90[AMR][1000 genomes]
rs62230277	0.88[AMR][1000 genomes]
rs62230292	0.98[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs62230293	0.98[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs73047766	0.94[AMR][1000 genomes];0.94[EUR][1000 genomes]

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:25159200-25162400	Weak transcription	Stomach Mucosa	stomach
2	chr3:25161400-25162800	Enhancers	Rectal Mucosa Donor 31	rectum
3	chr3:25161600-25162400	Enhancers	Sigmoid Colon	Sigmoid Colon

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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