Variant report
Variant | rs62260224 |
---|---|
Chromosome Location | chr3:34932005-34932006 |
allele | C/T |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:1)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
(count:1 , 50 per page) page:
1
No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr3:34927797..34931152-chr3:34931708..34934301,3 | K562 | blood: |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs11925888 | 0.87[ASN][1000 genomes] |
rs12053892 | 0.81[AFR][1000 genomes];0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs12632359 | 0.90[AMR][1000 genomes];0.91[EUR][1000 genomes];0.82[ASN][1000 genomes] |
rs1357428 | 0.84[ASN][1000 genomes] |
rs1474299 | 0.87[AFR][1000 genomes];1.00[ASN][1000 genomes] |
rs17032340 | 0.91[ASN][1000 genomes] |
rs17032385 | 0.89[AFR][1000 genomes];0.97[ASN][1000 genomes] |
rs2071488 | 0.89[ASN][1000 genomes] |
rs4549234 | 0.91[ASN][1000 genomes] |
rs4575830 | 0.98[ASN][1000 genomes] |
rs4678716 | 0.91[ASN][1000 genomes] |
rs4678717 | 0.94[ASN][1000 genomes] |
rs4678724 | 0.99[ASN][1000 genomes] |
rs56235912 | 0.87[AFR][1000 genomes];0.98[ASN][1000 genomes] |
rs58778451 | 0.87[ASN][1000 genomes] |
rs59750319 | 0.87[ASN][1000 genomes] |
rs6550306 | 0.86[ASN][1000 genomes] |
rs6792813 | 0.91[ASN][1000 genomes] |
rs73061969 | 0.82[AFR][1000 genomes];0.84[AMR][1000 genomes];0.96[ASN][1000 genomes] |
rs73063843 | 0.96[ASN][1000 genomes] |
rs73063864 | 0.87[ASN][1000 genomes] |
rs7625986 | 0.83[ASN][1000 genomes] |
rs7653203 | 0.87[AMR][1000 genomes];0.89[EUR][1000 genomes];0.87[ASN][1000 genomes] |
rs940047 | 0.85[ASN][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv590052 | chr3:34910172-34937547 | Weak transcription Enhancers | TF binding regionChromatin interactive regionlncRNA | 1 gene(s) | inside rSNPs | n/a |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr3:34932000-34933800 | Weak transcription | Fetal Brain Male | brain |