The 2.0 version of rSNPBase

Variant report

Variant rs62305269
Chromosome Location chr4:56373404-56373405
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:103 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:56302400-56375600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr4:56304800-56375800 Weak transcription Pancreas Pancrea
3 chr4:56314400-56377200 Weak transcription Primary T helper naive cells from peripheral blood blood
4 chr4:56332600-56377800 Weak transcription Gastric stomach
5 chr4:56336000-56376800 Weak transcription Primary T killer memory cells from peripheral blood blood
6 chr4:56337400-56377000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
7 chr4:56341400-56385600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
8 chr4:56341600-56377000 Weak transcription H9 Cell Line embryonic stem cell
9 chr4:56341800-56376400 Weak transcription Brain Substantia Nigra brain
10 chr4:56341800-56376800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
11 chr4:56342200-56377600 Weak transcription Stomach Smooth Muscle stomach
12 chr4:56342400-56376600 Weak transcription Skeletal Muscle Male skeletal muscle
13 chr4:56342400-56378200 Weak transcription Brain Cingulate Gyrus brain
14 chr4:56342800-56391400 Weak transcription Psoas Muscle Psoas
15 chr4:56344600-56378200 Weak transcription Brain Germinal Matrix brain
16 chr4:56355400-56374000 Weak transcription Rectal Mucosa Donor 29 rectum
17 chr4:56355400-56375000 Weak transcription Duodenum Smooth Muscle Duodenum
18 chr4:56355400-56377000 Weak transcription Primary T helper cells PMA-I stimulated --
19 chr4:56355400-56377000 Weak transcription Skeletal Muscle Female skeletal muscle
20 chr4:56355400-56377200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
21 chr4:56355400-56377400 Weak transcription Brain Anterior Caudate brain
22 chr4:56355400-56378000 Weak transcription Aorta Aorta
23 chr4:56355400-56379200 Weak transcription Ovary ovary
24 chr4:56355400-56379200 Weak transcription Sigmoid Colon Sigmoid Colon
25 chr4:56355400-56380800 Weak transcription Rectal Mucosa Donor 31 rectum
26 chr4:56355400-56381800 Weak transcription Primary T regulatory cells fromperipheralblood blood
27 chr4:56355400-56386200 Weak transcription iPS-18 Cell Line embryonic stem cell
28 chr4:56355600-56374000 Weak transcription iPS-20b Cell Line embryonic stem cell
29 chr4:56355600-56377000 Weak transcription Primary monocytes fromperipheralblood blood
30 chr4:56355600-56377000 Weak transcription Primary T helper cells fromperipheralblood blood
31 chr4:56355800-56376000 Weak transcription HUES48 Cell Line embryonic stem cell
32 chr4:56355800-56376000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
33 chr4:56356800-56376800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
34 chr4:56357200-56374000 Weak transcription Dnd41 blood
35 chr4:56357400-56375800 Weak transcription HUES64 Cell Line embryonic stem cell
36 chr4:56361200-56375600 Weak transcription Primary hematopoietic stem cells blood
37 chr4:56361200-56387400 Weak transcription Left Ventricle heart
38 chr4:56361400-56375000 Weak transcription Brain Inferior Temporal Lobe brain
39 chr4:56361400-56375600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
40 chr4:56361400-56377000 Weak transcription Primary B cells from peripheral blood blood
41 chr4:56361400-56381000 Weak transcription Fetal Brain Male brain
42 chr4:56361600-56377200 Weak transcription Adipose Nuclei Adipose
43 chr4:56361600-56411800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
44 chr4:56361800-56384400 Weak transcription Primary B cells from cord blood blood
45 chr4:56362000-56375000 Weak transcription Fetal Muscle Trunk muscle
46 chr4:56362000-56377200 Weak transcription Fetal Adrenal Gland Adrenal Gland
47 chr4:56364000-56375000 Weak transcription HepG2 liver
48 chr4:56364600-56374600 Weak transcription NHLF lung
49 chr4:56364600-56376800 Weak transcription Rectal Smooth Muscle rectum
50 chr4:56365000-56375600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung

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Last update: Aug 31, 2015