Variant report

Variant	rs62307195
Chromosome Location	chr4:96555822-96555823
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs11729177	0.80[ASN][1000 genomes]
rs13152656	0.80[ASN][1000 genomes]
rs1436585	0.80[ASN][1000 genomes]
rs17581279	0.80[ASN][1000 genomes]
rs1865848	0.80[ASN][1000 genomes]
rs2002278	0.80[ASN][1000 genomes]
rs2196514	0.80[ASN][1000 genomes]
rs56218239	0.80[ASN][1000 genomes]
rs62307197	1.00[ASN][1000 genomes]
rs62307198	1.00[ASN][1000 genomes]
rs6843943	0.80[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv830012	chr4:96547783-96746163	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
2	esv1844506	chr4:96554889-96704333	Flanking Active TSS Weak transcription Enhancers Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:96550400-96560000	Weak transcription	Cortex derived primary cultured neurospheres	brain

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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