The 2.0 version of rSNPBase

Variant report

Variant rs62308864
Chromosome Location chr4:88130752-88130753
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:61 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:88081800-88140200 Weak transcription Aorta Aorta
2 chr4:88089600-88131000 Weak transcription Ovary ovary
3 chr4:88091800-88133600 Weak transcription Rectal Mucosa Donor 31 rectum
4 chr4:88092200-88134800 Weak transcription Sigmoid Colon Sigmoid Colon
5 chr4:88097600-88140400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
6 chr4:88109600-88133600 Weak transcription Fetal Lung lung
7 chr4:88115800-88131000 Weak transcription Gastric stomach
8 chr4:88116400-88138000 Weak transcription HepG2 liver
9 chr4:88119400-88132600 Weak transcription Psoas Muscle Psoas
10 chr4:88121200-88134600 Weak transcription Pancreas Pancrea
11 chr4:88122400-88140000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
12 chr4:88125400-88134600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
13 chr4:88125400-88134800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
14 chr4:88125400-88140200 Weak transcription Fetal Intestine Large intestine
15 chr4:88125600-88134600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
16 chr4:88125800-88134600 Weak transcription Skeletal Muscle Male skeletal muscle
17 chr4:88126000-88132800 Weak transcription Fetal Heart heart
18 chr4:88126800-88140000 Weak transcription Fetal Stomach stomach
19 chr4:88127200-88140200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
20 chr4:88127800-88132200 Weak transcription Muscle Satellite Cultured Cells --
21 chr4:88128400-88130800 Weak transcription Thymus Thymus
22 chr4:88128400-88140000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
23 chr4:88128600-88140000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
24 chr4:88128600-88140200 Weak transcription Breast Myoepithelial Primary Cells Breast
25 chr4:88128800-88134800 Weak transcription Brain Germinal Matrix brain
26 chr4:88129000-88132800 Weak transcription Right Ventricle heart
27 chr4:88129000-88133800 Weak transcription Skeletal Muscle Female skeletal muscle
28 chr4:88129000-88134400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
29 chr4:88129000-88134600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
30 chr4:88129000-88134600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
31 chr4:88129000-88134600 Weak transcription Spleen Spleen
32 chr4:88129200-88131000 Weak transcription Right Atrium heart
33 chr4:88129400-88132800 Weak transcription K562 blood
34 chr4:88129400-88139800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
35 chr4:88129800-88140000 Weak transcription Fetal Intestine Small intestine
36 chr4:88130200-88131200 Flanking Active TSS Primary B cells from cord blood blood
37 chr4:88130200-88131400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
38 chr4:88130400-88130800 Enhancers Primary T helper cells fromperipheralblood blood
39 chr4:88130400-88131000 Flanking Active TSS Primary hematopoietic stem cells blood
40 chr4:88130400-88131000 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
41 chr4:88130400-88131000 Enhancers Duodenum Mucosa Duodenum
42 chr4:88130400-88131000 Active TSS Duodenum Smooth Muscle Duodenum
43 chr4:88130400-88131000 Active TSS Rectal Mucosa Donor 29 rectum
44 chr4:88130400-88131000 Active TSS NHDF-Ad bronchial
45 chr4:88130400-88131200 Flanking Active TSS GM12878-XiMat blood
46 chr4:88130400-88131400 Flanking Active TSS Primary neutrophils fromperipheralblood blood
47 chr4:88130400-88131400 Enhancers Primary B cells from peripheral blood blood
48 chr4:88130400-88131400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
49 chr4:88130400-88131600 Enhancers Primary T helper cells PMA-I stimulated --
50 chr4:88130400-88131600 Enhancers Liver Liver

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Last update: Aug 31, 2015