Variant report

Variant	rs62341524
Chromosome Location	chr4:148084003-148084004
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs17022603	1.00[AMR][1000 genomes]
rs17474227	1.00[AFR][1000 genomes]
rs55693428	1.00[AMR][1000 genomes]
rs62341479	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs62341480	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs62341845	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs62342963	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs62343027	1.00[AFR][1000 genomes]
rs62343692	1.00[AMR][1000 genomes]
rs62343698	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1024629	chr4:147987351-148277008	Weak transcription Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Active TSS Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region miRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:148080000-148084400	Weak transcription	Right Atrium	heart
2	chr4:148080200-148088800	Weak transcription	Muscle Satellite Cultured Cells	--
3	chr4:148080400-148084400	Weak transcription	Fetal Lung	lung
4	chr4:148083800-148085800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
5	chr4:148084000-148084600	Enhancers	Fetal Stomach	stomach

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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