Variant report

Variant rs62365031
Chromosome Location chr5:80565180-80565181
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:57 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:80543800-80565600 Weak transcription HUES48 Cell Line embryonic stem cell
2 chr5:80545400-80565200 Weak transcription Primary B cells from peripheral blood blood
3 chr5:80548800-80568000 Strong transcription Skeletal Muscle Female skeletal muscle
4 chr5:80549400-80565800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
5 chr5:80549400-80565800 Weak transcription Lung lung
6 chr5:80552800-80567200 Weak transcription Brain Anterior Caudate brain
7 chr5:80554600-80576400 Weak transcription Pancreas Pancrea
8 chr5:80555200-80568600 Weak transcription Fetal Stomach stomach
9 chr5:80555600-80565600 Weak transcription Fetal Muscle Trunk muscle
10 chr5:80556000-80565800 Weak transcription Adipose Nuclei Adipose
11 chr5:80558200-80568000 Strong transcription Skeletal Muscle Male skeletal muscle
12 chr5:80558800-80565800 Weak transcription Cortex derived primary cultured neurospheres brain
13 chr5:80559600-80568400 Weak transcription Rectal Mucosa Donor 29 rectum
14 chr5:80559800-80567200 Weak transcription Fetal Muscle Leg muscle
15 chr5:80560000-80566000 Weak transcription Ovary ovary
16 chr5:80560200-80565800 Weak transcription HUES64 Cell Line embryonic stem cell
17 chr5:80560200-80570000 Weak transcription Primary B cells from cord blood blood
18 chr5:80560400-80565800 Weak transcription Stomach Smooth Muscle stomach
19 chr5:80560400-80567200 Weak transcription Primary T cells from cord blood blood
20 chr5:80560600-80565400 Weak transcription iPS-20b Cell Line embryonic stem cell
21 chr5:80563400-80565200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
22 chr5:80563600-80565400 Weak transcription Right Ventricle heart
23 chr5:80563600-80567400 Weak transcription Brain Substantia Nigra brain
24 chr5:80563600-80567400 Weak transcription Psoas Muscle Psoas
25 chr5:80563800-80565400 Enhancers NHEK skin
26 chr5:80563800-80566400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
27 chr5:80564000-80565600 Enhancers iPS-15b Cell Line embryonic stem cell
28 chr5:80564000-80566200 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
29 chr5:80564200-80565200 Genic enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
30 chr5:80564200-80565200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
31 chr5:80564200-80565800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
32 chr5:80564200-80565800 Enhancers NH-A brain
33 chr5:80564200-80566000 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
34 chr5:80564200-80566000 Enhancers Muscle Satellite Cultured Cells --
35 chr5:80564200-80566000 Enhancers NHDF-Ad bronchial
36 chr5:80564200-80566000 Enhancers NHLF lung
37 chr5:80564200-80566000 Enhancers Osteobl bone
38 chr5:80564200-80566200 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
39 chr5:80564200-80566400 Enhancers HepG2 liver
40 chr5:80564400-80565200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
41 chr5:80564400-80566000 Enhancers Hela-S3 cervix
42 chr5:80564400-80566200 Enhancers A549 lung
43 chr5:80564400-80566400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
44 chr5:80564400-80566600 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
45 chr5:80564600-80565200 Enhancers HSMMtube muscle
46 chr5:80564600-80566200 Strong transcription Left Ventricle heart
47 chr5:80564800-80565800 Enhancers HUES6 Cell Line embryonic stem cell
48 chr5:80564800-80565800 Enhancers Dnd41 blood
49 chr5:80564800-80566000 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
50 chr5:80564800-80566200 Enhancers Gastric stomach

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