The 2.0 version of rSNPBase

Variant report

Variant rs62369751
Chromosome Location chr5:16581490-16581491
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:46 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:16543200-16591600 Weak transcription Primary T killer naive cells fromperipheralblood blood
2 chr5:16543600-16589800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
3 chr5:16571400-16587200 Weak transcription Primary T regulatory cells fromperipheralblood blood
4 chr5:16571400-16588200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
5 chr5:16573800-16585200 Weak transcription Pancreas Pancrea
6 chr5:16574200-16585200 Weak transcription Fetal Intestine Small intestine
7 chr5:16574800-16583000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
8 chr5:16574800-16589800 Weak transcription Thymus Thymus
9 chr5:16575000-16588000 Weak transcription Pancreatic Islets Pancreatic Islet
10 chr5:16575200-16585800 Weak transcription Primary T helper cells PMA-I stimulated --
11 chr5:16575600-16591600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr5:16575800-16583000 Weak transcription Primary T cells fromperipheralblood blood
13 chr5:16575800-16587600 Weak transcription Primary T helper cells fromperipheralblood blood
14 chr5:16576000-16582000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
15 chr5:16576000-16587200 Weak transcription Primary T helper naive cells fromperipheralblood blood
16 chr5:16576400-16582200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
17 chr5:16577400-16581600 Enhancers Brain Cingulate Gyrus brain
18 chr5:16577400-16581800 Enhancers Cortex derived primary cultured neurospheres brain
19 chr5:16577600-16581800 Enhancers Brain Hippocampus Middle brain
20 chr5:16577800-16581600 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
21 chr5:16578400-16606800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
22 chr5:16578600-16581600 Enhancers Brain Dorsolateral Prefrontal Cortex brain
23 chr5:16578600-16581800 Enhancers Breast Myoepithelial Primary Cells Breast
24 chr5:16578600-16581800 Enhancers Brain Angular Gyrus brain
25 chr5:16578600-16582400 Enhancers Brain Inferior Temporal Lobe brain
26 chr5:16579000-16582800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
27 chr5:16579000-16583000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
28 chr5:16579200-16584000 Weak transcription HUES48 Cell Line embryonic stem cell
29 chr5:16579200-16586800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
30 chr5:16579400-16581800 Enhancers Brain Substantia Nigra brain
31 chr5:16579400-16582600 Weak transcription iPS-15b Cell Line embryonic stem cell
32 chr5:16579400-16584200 Weak transcription H9 Cell Line embryonic stem cell
33 chr5:16579400-16593200 Weak transcription ES-I3 Cell Line embryonic stem cell
34 chr5:16579600-16585400 Weak transcription iPS-20b Cell Line embryonic stem cell
35 chr5:16580400-16581600 Enhancers Left Ventricle heart
36 chr5:16580600-16581600 Weak transcription HMEC breast
37 chr5:16580600-16581600 Weak transcription NHEK skin
38 chr5:16581000-16581600 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
39 chr5:16581000-16581600 ZNF genes & repeats Right Atrium heart
40 chr5:16581000-16585200 Weak transcription Liver Liver
41 chr5:16581000-16598400 Weak transcription Stomach Smooth Muscle stomach
42 chr5:16581200-16588600 Weak transcription Fetal Heart heart
43 chr5:16581400-16585400 Weak transcription Brain Anterior Caudate brain
44 chr5:16581400-16587000 Weak transcription Primary T cells from cord blood blood
45 chr5:16581400-16593200 Weak transcription Right Ventricle heart
46 chr5:16581400-16596000 Weak transcription Fetal Brain Female brain

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Last update: Aug 31, 2015