Variant report

Variant rs62374673
Chromosome Location chr5:124684644-124684645
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:58 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:124679200-124684800 Weak transcription NH-A brain
2 chr5:124682200-124685600 Enhancers Fetal Stomach stomach
3 chr5:124682800-124684800 Flanking Active TSS Fetal Lung lung
4 chr5:124683000-124684800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
5 chr5:124683200-124686000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
6 chr5:124683400-124686000 Enhancers H9 Cell Line embryonic stem cell
7 chr5:124683600-124685000 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived
8 chr5:124683600-124685800 Enhancers iPS-15b Cell Line embryonic stem cell
9 chr5:124683800-124684800 Flanking Active TSS NHDF-Ad bronchial
10 chr5:124683800-124685000 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
11 chr5:124683800-124685400 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
12 chr5:124683800-124685400 Active TSS Brain Anterior Caudate brain
13 chr5:124683800-124685800 Enhancers H1 Cell Line embryonic stem cell
14 chr5:124683800-124685800 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
15 chr5:124683800-124685800 Enhancers HUES6 Cell Line embryonic stem cell
16 chr5:124683800-124686200 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
17 chr5:124684000-124684800 Active TSS ES-WA7 Cell Line embryonic stem cell
18 chr5:124684000-124684800 Active TSS Brain Dorsolateral Prefrontal Cortex brain
19 chr5:124684000-124685000 Flanking Active TSS HUES48 Cell Line embryonic stem cell
20 chr5:124684000-124685000 Flanking Active TSS Brain Germinal Matrix brain
21 chr5:124684000-124685200 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
22 chr5:124684000-124685200 Weak transcription Fetal Intestine Small intestine
23 chr5:124684000-124685400 Flanking Active TSS iPS-20b Cell Line embryonic stem cell
24 chr5:124684000-124685400 Active TSS Brain Inferior Temporal Lobe brain
25 chr5:124684000-124685600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
26 chr5:124684000-124685600 Enhancers Muscle Satellite Cultured Cells --
27 chr5:124684000-124685800 Enhancers Fetal Kidney kidney
28 chr5:124684200-124685400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
29 chr5:124684200-124685400 Active TSS Brain Substantia Nigra brain
30 chr5:124684200-124685800 Enhancers NHLF lung
31 chr5:124684400-124684800 Flanking Active TSS ES-I3 Cell Line embryonic stem cell
32 chr5:124684400-124684800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
33 chr5:124684400-124684800 Flanking Active TSS Cortex derived primary cultured neurospheres brain
34 chr5:124684400-124684800 Enhancers Fetal Adrenal Gland Adrenal Gland
35 chr5:124684400-124685000 Weak transcription Left Ventricle heart
36 chr5:124684400-124685200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
37 chr5:124684400-124685200 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
38 chr5:124684400-124685200 Enhancers Fetal Brain Male brain
39 chr5:124684400-124685400 Weak transcription Right Atrium heart
40 chr5:124684400-124685600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
41 chr5:124684600-124684800 Enhancers Adipose Nuclei Adipose
42 chr5:124684600-124684800 Flanking Active TSS Fetal Brain Female brain
43 chr5:124684600-124685000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
44 chr5:124684600-124685000 Flanking Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
45 chr5:124684600-124685000 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
46 chr5:124684600-124685000 Flanking Active TSS Brain Angular Gyrus brain
47 chr5:124684600-124685000 Flanking Active TSS Brain Hippocampus Middle brain
48 chr5:124684600-124685000 Enhancers Fetal Intestine Large intestine
49 chr5:124684600-124685000 Weak transcription Fetal Muscle Leg muscle
50 chr5:124684600-124685000 Weak transcription Psoas Muscle Psoas

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