Variant report

Variant	rs62374687
Chromosome Location	chr5:124693143-124693144
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 18 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:18)

rs_ID	r²[population]
rs17465113	0.83[EUR][1000 genomes]
rs62374665	0.83[EUR][1000 genomes]
rs62374669	0.93[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs62374670	0.90[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs62374671	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs62374673	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs62374685	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs62374686	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs62374698	0.90[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs62374716	0.81[EUR][1000 genomes]
rs62374718	1.00[AFR][1000 genomes];0.83[EUR][1000 genomes]
rs62374720	0.83[EUR][1000 genomes]
rs62374721	0.83[EUR][1000 genomes]
rs62374724	1.00[AFR][1000 genomes];0.83[EUR][1000 genomes]
rs62374725	0.83[EUR][1000 genomes]
rs62374727	0.83[EUR][1000 genomes]
rs62374730	0.81[EUR][1000 genomes]
rs62374731	0.81[EUR][1000 genomes]

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:124685800-124694000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
2	chr5:124689000-124693200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr5:124693000-124694200	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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