Variant report

Variant rs62440052
Chromosome Location chr6:150488944-150488945
allele A/C/T
Outlinks Ensembl   UCSC
Chromatin state (count:28 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:150474200-150493600 Weak transcription Right Ventricle heart
2 chr6:150476000-150490600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
3 chr6:150479200-150495800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr6:150485200-150489200 Enhancers Fetal Heart heart
5 chr6:150486200-150497400 Weak transcription Right Atrium heart
6 chr6:150486400-150492200 Weak transcription Skeletal Muscle Female skeletal muscle
7 chr6:150486800-150490600 Weak transcription HMEC breast
8 chr6:150487200-150490400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
9 chr6:150487200-150490600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
10 chr6:150487200-150490600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
11 chr6:150487200-150490600 Weak transcription NHEK skin
12 chr6:150487600-150489000 Enhancers Fetal Muscle Leg muscle
13 chr6:150488000-150490600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
14 chr6:150488200-150492200 Weak transcription Left Ventricle heart
15 chr6:150488200-150497800 Weak transcription Colonic Mucosa Colon
16 chr6:150488400-150489600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
17 chr6:150488600-150489000 Enhancers H9 Cell Line embryonic stem cell
18 chr6:150488600-150489000 Enhancers GM12878-XiMat blood
19 chr6:150488600-150489000 Flanking Active TSS K562 blood
20 chr6:150488600-150489200 Enhancers Placenta Placenta
21 chr6:150488800-150489000 Enhancers Skeletal Muscle Male skeletal muscle
22 chr6:150488800-150489200 Weak transcription Rectal Smooth Muscle rectum
23 chr6:150488800-150489400 Enhancers Primary B cells from peripheral blood blood
24 chr6:150488800-150489800 Active TSS A549 lung
25 chr6:150488800-150490400 Enhancers Primary B cells from cord blood blood
26 chr6:150488800-150491200 Enhancers Primary hematopoietic stem cells short term culture blood
27 chr6:150488800-150492000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
28 chr6:150488800-150492000 Weak transcription Psoas Muscle Psoas

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