Variant report

Variant	rs62447359
Chromosome Location	chr7:48690088-48690089
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs12718290	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12718292	1.00[AFR][1000 genomes];0.90[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13223000	0.90[EUR][1000 genomes]
rs13234438	0.80[AMR][1000 genomes];0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13234500	0.90[EUR][1000 genomes]
rs34021932	0.90[EUR][1000 genomes]
rs34598210	0.90[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs35302464	0.90[EUR][1000 genomes]
rs35316325	0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35483521	1.00[AFR][1000 genomes];0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62447337	0.86[EUR][1000 genomes]
rs62447338	0.84[EUR][1000 genomes]
rs62447353	0.85[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs62448770	0.85[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv606894	chr7:48663637-48718598	ZNF genes & repeats Weak transcription Strong transcription Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Genic enhancers Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:48689000-48691200	Weak transcription	Primary neutrophils fromperipheralblood	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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