Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:126314710..126317465-chr7:126320415..126322546,2	K562	blood:

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs1008906	0.94[AFR][1000 genomes];0.95[AMR][1000 genomes];0.85[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11764888	0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11765912	0.82[AMR][1000 genomes];0.85[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11769015	0.80[ASN][1000 genomes]
rs1468157	0.85[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs17149975	0.80[ASN][1000 genomes]
rs17150011	0.80[ASN][1000 genomes]
rs17610771	0.80[ASN][1000 genomes]
rs2299495	0.85[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs41463444	0.80[ASN][1000 genomes]
rs56142844	0.80[ASN][1000 genomes]
rs62477862	0.80[ASN][1000 genomes]
rs62477869	0.80[ASN][1000 genomes]
rs62477942	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62477945	0.90[AFR][1000 genomes];0.85[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs62477947	0.85[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs62479322	0.80[ASN][1000 genomes]
rs73224961	0.80[ASN][1000 genomes]
rs73224962	0.80[ASN][1000 genomes]
rs73224963	0.80[ASN][1000 genomes]
rs7805288	0.99[AFR][1000 genomes];0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7805959	0.95[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9690442	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv529300	chr7:125669493-126587858	Weak transcription ZNF genes & repeats Enhancers Flanking Active TSS Active TSS Strong transcription Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
2	nsv1032938	chr7:126067684-126587859	Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
3	nsv539119	chr7:126067684-126587859	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
4	nsv889187	chr7:126219766-126478190	Flanking Active TSS Weak transcription Enhancers ZNF genes & repeats Active TSS Bivalent Enhancer	Chromatin interactive region	5 gene(s)	inside rSNPs	diseases
5	nsv1032108	chr7:126278349-126362592	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats	Chromatin interactive region	5 gene(s)	inside rSNPs	diseases
6	nsv5939	chr7:126279355-126322778	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats	Chromatin interactive region	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:126321200-126322000	Enhancers	iPS-18 Cell Line	embryonic stem cell
2	chr7:126321400-126323600	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
3	chr7:126321800-126325000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
4	chr7:126321800-126328800	Weak transcription	iPS-20b Cell Line	embryonic stem cell

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