The 2.0 version of rSNPBase

Variant report

Variant rs62482781
Chromosome Location chr7:105434752-105434753
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:103 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:105359800-105438600 Weak transcription Pancreas Pancrea
2 chr7:105384600-105438600 Weak transcription Spleen Spleen
3 chr7:105385000-105434800 Weak transcription Monocytes-CD14+_RO01746 blood
4 chr7:105400600-105438400 Weak transcription Duodenum Mucosa Duodenum
5 chr7:105400800-105436800 Weak transcription Rectal Mucosa Donor 29 rectum
6 chr7:105411200-105435400 Weak transcription Right Atrium heart
7 chr7:105414800-105443600 Weak transcription Rectal Mucosa Donor 31 rectum
8 chr7:105417200-105441800 Weak transcription HepG2 liver
9 chr7:105417400-105439200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
10 chr7:105418000-105435400 Weak transcription Brain Substantia Nigra brain
11 chr7:105418200-105440600 Weak transcription Skeletal Muscle Male skeletal muscle
12 chr7:105418400-105435400 Weak transcription Right Ventricle heart
13 chr7:105418400-105436000 Weak transcription H9 Cell Line embryonic stem cell
14 chr7:105418400-105439200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr7:105418400-105446400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
16 chr7:105418600-105435000 Weak transcription Liver Liver
17 chr7:105418600-105435200 Weak transcription Rectal Smooth Muscle rectum
18 chr7:105420600-105435400 Weak transcription Brain Inferior Temporal Lobe brain
19 chr7:105420800-105439600 Weak transcription Psoas Muscle Psoas
20 chr7:105421200-105437200 Weak transcription HUES64 Cell Line embryonic stem cell
21 chr7:105421600-105435000 Weak transcription Fetal Lung lung
22 chr7:105421600-105435600 Weak transcription Brain Cingulate Gyrus brain
23 chr7:105422000-105452000 Weak transcription Colonic Mucosa Colon
24 chr7:105423000-105435200 Weak transcription Small Intestine intestine
25 chr7:105423200-105440400 Weak transcription Primary T helper cells PMA-I stimulated --
26 chr7:105423400-105437600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
27 chr7:105424000-105435000 Weak transcription Osteobl bone
28 chr7:105425000-105437400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
29 chr7:105425400-105435400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
30 chr7:105426400-105435400 Weak transcription Skeletal Muscle Female skeletal muscle
31 chr7:105426400-105440800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
32 chr7:105427000-105435200 Weak transcription Fetal Brain Male brain
33 chr7:105427800-105434800 Weak transcription Duodenum Smooth Muscle Duodenum
34 chr7:105427800-105435400 Weak transcription Fetal Brain Female brain
35 chr7:105428200-105440200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
36 chr7:105428800-105435200 Weak transcription Stomach Mucosa stomach
37 chr7:105429000-105434800 Weak transcription Fetal Muscle Leg muscle
38 chr7:105429000-105435800 Weak transcription Adipose Nuclei Adipose
39 chr7:105429000-105438600 Weak transcription Left Ventricle heart
40 chr7:105429000-105440600 Weak transcription Primary T helper naive cells fromperipheralblood blood
41 chr7:105429200-105434800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
42 chr7:105429200-105435200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
43 chr7:105429200-105436000 Weak transcription Brain Hippocampus Middle brain
44 chr7:105429200-105437400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
45 chr7:105429200-105437800 Weak transcription Fetal Intestine Large intestine
46 chr7:105429200-105446000 Weak transcription Brain Anterior Caudate brain
47 chr7:105429400-105435200 Weak transcription Cortex derived primary cultured neurospheres brain
48 chr7:105429600-105439400 Weak transcription Primary T cells from cord blood blood
49 chr7:105429600-105440200 Weak transcription Sigmoid Colon Sigmoid Colon
50 chr7:105429800-105435200 Weak transcription Fetal Adrenal Gland Adrenal Gland

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Last update: Aug 31, 2015