Variant report

Variant rs62531216
Chromosome Location chr9:696146-696147
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:95 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:653400-698000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr9:670800-706800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
3 chr9:682800-696800 Enhancers Placenta Amnion Placenta Amnion
4 chr9:688400-698000 Weak transcription Gastric stomach
5 chr9:690400-697000 Enhancers Stomach Mucosa stomach
6 chr9:690800-700600 Weak transcription Small Intestine intestine
7 chr9:691000-698400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
8 chr9:691200-706600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr9:692000-697400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
10 chr9:692000-698800 Enhancers Breast Myoepithelial Primary Cells Breast
11 chr9:692200-697600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
12 chr9:692600-696600 Enhancers Fetal Intestine Large intestine
13 chr9:692800-696600 Enhancers Fetal Adrenal Gland Adrenal Gland
14 chr9:693200-697200 Active TSS Aorta Aorta
15 chr9:693600-697400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
16 chr9:693800-696400 Weak transcription ES-I3 Cell Line embryonic stem cell
17 chr9:693800-696400 Weak transcription HUES6 Cell Line embryonic stem cell
18 chr9:693800-700400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
19 chr9:693800-700400 Weak transcription iPS-15b Cell Line embryonic stem cell
20 chr9:693800-700600 Weak transcription H9 Cell Line embryonic stem cell
21 chr9:694000-697000 Enhancers Fetal Stomach stomach
22 chr9:694000-697000 Flanking Active TSS Stomach Smooth Muscle stomach
23 chr9:694000-698000 Weak transcription HUES48 Cell Line embryonic stem cell
24 chr9:694000-698200 Weak transcription H1 Cell Line embryonic stem cell
25 chr9:694200-698400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
26 chr9:694400-698200 Weak transcription iPS-18 Cell Line embryonic stem cell
27 chr9:694400-699600 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
28 chr9:694600-697200 Enhancers Ovary ovary
29 chr9:694600-698400 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
30 chr9:694600-699000 Enhancers Fetal Heart heart
31 chr9:694800-697000 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
32 chr9:694800-698000 Weak transcription iPS-20b Cell Line embryonic stem cell
33 chr9:694800-698200 Enhancers Psoas Muscle Psoas
34 chr9:694800-698200 Enhancers HMEC breast
35 chr9:694800-699200 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
36 chr9:694800-700200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
37 chr9:694800-701600 Enhancers Cortex derived primary cultured neurospheres brain
38 chr9:695000-696400 Weak transcription Placenta Placenta
39 chr9:695000-698400 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
40 chr9:695000-706800 Weak transcription Sigmoid Colon Sigmoid Colon
41 chr9:695200-696400 Enhancers Fetal Muscle Trunk muscle
42 chr9:695200-696600 Weak transcription Pancreatic Islets Pancreatic Islet
43 chr9:695200-697400 Enhancers Fetal Muscle Leg muscle
44 chr9:695200-698600 Enhancers Liver Liver
45 chr9:695200-700600 Enhancers Rectal Smooth Muscle rectum
46 chr9:695200-706000 Weak transcription Fetal Kidney kidney
47 chr9:695200-706800 Weak transcription Spleen Spleen
48 chr9:695400-696400 Enhancers Duodenum Smooth Muscle Duodenum
49 chr9:695400-696400 Weak transcription Rectal Mucosa Donor 31 rectum
50 chr9:695400-696400 Enhancers NH-A brain

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