Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:150673211..150675475-chr6:150711661..150714265,2	MCF-7	breast:
2	chr6:150711903..150714154-chr6:151185170..151187778,2	K562	blood:

Variant related genes	Relation type
ENSG00000120254	Chromatin interaction

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs11155729	0.86[YRI][hapmap]
rs3734737	0.86[YRI][hapmap]
rs607232	0.93[ASN][1000 genomes]
rs608175	0.91[CHB][hapmap];1.00[JPT][hapmap];0.93[ASN][1000 genomes]
rs619252	0.93[ASN][1000 genomes]
rs620710	0.93[ASN][1000 genomes]
rs624510	0.93[ASN][1000 genomes]
rs625825	0.93[ASN][1000 genomes]
rs626249	0.93[ASN][1000 genomes]
rs640074	0.92[CHB][hapmap];1.00[JPT][hapmap];0.93[ASN][1000 genomes]
rs648205	0.92[ASN][1000 genomes]
rs671185	0.93[ASN][1000 genomes]
rs674026	0.91[CHB][hapmap];1.00[JPT][hapmap];0.93[ASN][1000 genomes]
rs685819	0.89[ASN][1000 genomes]
rs6906028	0.92[CHB][hapmap];1.00[JPT][hapmap];0.95[ASN][1000 genomes]
rs6911342	0.95[ASN][1000 genomes]
rs694489	0.93[ASN][1000 genomes]
rs7757225	0.86[CHB][hapmap];1.00[JPT][hapmap];0.93[ASN][1000 genomes]
rs7772011	0.91[CHB][hapmap];1.00[JPT][hapmap];0.93[ASN][1000 genomes]
rs805993	0.95[ASN][1000 genomes]
rs982479	0.83[AMR][1000 genomes];0.83[EUR][1000 genomes];0.85[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2763602	chr6:150581193-150720666	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:150710800-150713200	Enhancers	Liver	Liver
2	chr6:150712200-150719200	Weak transcription	Fetal Intestine Small	intestine

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