The 2.0 version of rSNPBase

Variant report

Variant rs6430938
Chromosome Location chr2:128162623-128162624
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:81 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:128146400-128165200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr2:128150400-128165000 Weak transcription HUES64 Cell Line embryonic stem cell
3 chr2:128152600-128165800 Weak transcription Aorta Aorta
4 chr2:128155800-128164800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
5 chr2:128156000-128163800 Enhancers A549 lung
6 chr2:128156200-128162800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
7 chr2:128156200-128163000 Weak transcription Brain Hippocampus Middle brain
8 chr2:128156200-128163000 Weak transcription Right Atrium heart
9 chr2:128156200-128165200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
10 chr2:128156400-128164200 Weak transcription Muscle Satellite Cultured Cells --
11 chr2:128156800-128165200 Weak transcription Pancreas Pancrea
12 chr2:128157000-128165400 Weak transcription Psoas Muscle Psoas
13 chr2:128158800-128162800 Weak transcription Left Ventricle heart
14 chr2:128158800-128163600 Enhancers Fetal Intestine Small intestine
15 chr2:128159200-128164800 Weak transcription NHDF-Ad bronchial
16 chr2:128159200-128165000 Weak transcription Duodenum Smooth Muscle Duodenum
17 chr2:128159200-128165200 Weak transcription Right Ventricle heart
18 chr2:128159200-128165200 Weak transcription NHLF lung
19 chr2:128159400-128165000 Weak transcription Osteobl bone
20 chr2:128159400-128165200 Weak transcription HSMM muscle
21 chr2:128159600-128164000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
22 chr2:128159600-128164800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
23 chr2:128159800-128164600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
24 chr2:128159800-128165000 Weak transcription NH-A brain
25 chr2:128159800-128165200 Weak transcription Placenta Placenta
26 chr2:128160200-128164400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
27 chr2:128160200-128164800 Weak transcription Breast Myoepithelial Primary Cells Breast
28 chr2:128160200-128165000 Weak transcription Stomach Mucosa stomach
29 chr2:128160200-128165000 Weak transcription Hela-S3 cervix
30 chr2:128160200-128165200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
31 chr2:128160400-128162800 Weak transcription Colonic Mucosa Colon
32 chr2:128160400-128162800 Weak transcription HepG2 liver
33 chr2:128160400-128164800 Weak transcription Placenta Amnion Placenta Amnion
34 chr2:128160800-128165200 Weak transcription Sigmoid Colon Sigmoid Colon
35 chr2:128161000-128163200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
36 chr2:128161200-128162800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
37 chr2:128161400-128163800 Enhancers Primary monocytes fromperipheralblood blood
38 chr2:128161400-128164600 Weak transcription Fetal Muscle Leg muscle
39 chr2:128161400-128165400 Weak transcription Ovary ovary
40 chr2:128162000-128163000 Enhancers Primary B cells from peripheral blood blood
41 chr2:128162000-128163000 Enhancers Primary hematopoietic stem cells short term culture blood
42 chr2:128162000-128163000 Enhancers GM12878-XiMat blood
43 chr2:128162000-128163200 Enhancers Primary B cells from cord blood blood
44 chr2:128162000-128163200 Enhancers Lung lung
45 chr2:128162000-128163600 Enhancers Duodenum Mucosa Duodenum
46 chr2:128162000-128163600 Enhancers Rectal Mucosa Donor 31 rectum
47 chr2:128162000-128163600 Enhancers HMEC breast
48 chr2:128162000-128163800 Enhancers Fetal Intestine Large intestine
49 chr2:128162000-128165800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
50 chr2:128162200-128162800 Enhancers Rectal Mucosa Donor 29 rectum

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Last update: Aug 31, 2015