Variant report

Variant	rs6433882
Chromosome Location	chr2:181904368-181904369
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 7 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs4289136	1.00[EUR][1000 genomes]
rs4343437	0.83[YRI][hapmap];0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4427978	0.84[YRI][hapmap];0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4588146	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs61040384	1.00[EUR][1000 genomes]
rs6433884	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73027486	1.00[EUR][1000 genomes]

No data

Chromatin state (count:18 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:181900600-181904400	Enhancers	NHLF	lung
2	chr2:181901200-181904400	Enhancers	NHDF-Ad	bronchial
3	chr2:181901200-181912200	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
4	chr2:181901400-181906400	Weak transcription	Psoas Muscle	Psoas
5	chr2:181901400-181910000	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
6	chr2:181901600-181911200	Weak transcription	GM12878-XiMat	blood
7	chr2:181902200-181926400	Weak transcription	HSMM	muscle
8	chr2:181902600-181909800	Weak transcription	Brain Germinal Matrix	brain
9	chr2:181902800-181905600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
10	chr2:181902800-181934200	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
11	chr2:181903000-181910200	Weak transcription	Sigmoid Colon	Sigmoid Colon
12	chr2:181903600-181905600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
13	chr2:181903600-181918800	Weak transcription	NHEK	skin
14	chr2:181903800-181904400	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
15	chr2:181903800-181917000	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
16	chr2:181903800-181934600	Weak transcription	NH-A	brain
17	chr2:181904000-181904400	Enhancers	Left Ventricle	heart
18	chr2:181904200-181919200	Weak transcription	Osteobl	bone

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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