The 2.0 version of rSNPBase

Variant report

Variant rs6434009
Chromosome Location chr2:184029695-184029696
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:118 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:183990000-184050000 Weak transcription Aorta Aorta
2 chr2:183990200-184036400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr2:183990800-184031000 Weak transcription Brain Inferior Temporal Lobe brain
4 chr2:183991000-184030400 Weak transcription Brain Hippocampus Middle brain
5 chr2:183991000-184048400 Weak transcription Brain Angular Gyrus brain
6 chr2:183991000-184053400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
7 chr2:183991000-184055400 Weak transcription Brain Cingulate Gyrus brain
8 chr2:183991200-184035400 Weak transcription Fetal Brain Male brain
9 chr2:183991400-184034000 Weak transcription NHLF lung
10 chr2:183991400-184049600 Weak transcription NHDF-Ad bronchial
11 chr2:183992400-184047600 Weak transcription Hela-S3 cervix
12 chr2:184009000-184043800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
13 chr2:184009200-184034000 Weak transcription Esophagus oesophagus
14 chr2:184009200-184043600 Weak transcription Psoas Muscle Psoas
15 chr2:184009200-184048400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
16 chr2:184009400-184047200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
17 chr2:184014200-184031400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
18 chr2:184014600-184030800 Weak transcription Muscle Satellite Cultured Cells --
19 chr2:184015000-184062000 Weak transcription Small Intestine intestine
20 chr2:184016000-184030400 Weak transcription ES-WA7 Cell Line embryonic stem cell
21 chr2:184016200-184030800 Strong transcription Breast Myoepithelial Primary Cells Breast
22 chr2:184018400-184047400 Weak transcription Pancreas Pancrea
23 chr2:184019000-184031200 Strong transcription Primary hematopoietic stem cells short term culture blood
24 chr2:184019000-184036600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
25 chr2:184019000-184043600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
26 chr2:184019000-184050000 Weak transcription Gastric stomach
27 chr2:184019000-184053400 Weak transcription Placenta Placenta
28 chr2:184019400-184030800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
29 chr2:184022000-184030000 Weak transcription Pancreatic Islets Pancreatic Islet
30 chr2:184022000-184031200 Strong transcription Dnd41 blood
31 chr2:184022400-184030800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
32 chr2:184022600-184030400 Strong transcription Liver Liver
33 chr2:184023000-184031400 Strong transcription Fetal Thymus thymus
34 chr2:184023000-184033000 Strong transcription Primary T cells from cord blood blood
35 chr2:184023400-184034200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
36 chr2:184024200-184031200 Strong transcription Cortex derived primary cultured neurospheres brain
37 chr2:184024200-184031400 Strong transcription H1 Cell Line embryonic stem cell
38 chr2:184025000-184031200 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
39 chr2:184025000-184031400 Strong transcription HUES6 Cell Line embryonic stem cell
40 chr2:184025000-184031400 Strong transcription iPS-20b Cell Line embryonic stem cell
41 chr2:184025200-184031200 Strong transcription HUES48 Cell Line embryonic stem cell
42 chr2:184025200-184031200 Strong transcription iPS-18 Cell Line embryonic stem cell
43 chr2:184025200-184031400 Strong transcription HUES64 Cell Line embryonic stem cell
44 chr2:184025400-184030800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
45 chr2:184025600-184031800 Strong transcription A549 lung
46 chr2:184026000-184054600 Weak transcription Primary T helper naive cells from peripheral blood blood
47 chr2:184026000-184057600 Weak transcription Placenta Amnion Placenta Amnion
48 chr2:184026400-184030400 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
49 chr2:184026600-184043200 Weak transcription Stomach Smooth Muscle stomach
50 chr2:184026600-184058800 Weak transcription Primary T killer naive cells fromperipheralblood blood

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Last update: Aug 31, 2015