The 2.0 version of rSNPBase

Variant report

Variant rs6447587
Chromosome Location chr4:47841437-47841438
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:108 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:47838800-47859800 Weak transcription Hela-S3 cervix
2 chr4:47839200-47850000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
3 chr4:47839200-47853800 Weak transcription HSMMtube muscle
4 chr4:47839400-47846000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr4:47839600-47845800 Weak transcription NHDF-Ad bronchial
6 chr4:47839800-47845400 Weak transcription HMEC breast
7 chr4:47839800-47850000 Weak transcription Gastric stomach
8 chr4:47839800-47874800 Weak transcription A549 lung
9 chr4:47839800-47875000 Weak transcription Brain Angular Gyrus brain
10 chr4:47839800-47885800 Weak transcription Lung lung
11 chr4:47840000-47844400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
12 chr4:47840000-47844400 Weak transcription Ovary ovary
13 chr4:47840000-47844800 Weak transcription HSMM muscle
14 chr4:47840000-47848800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
15 chr4:47840000-47852600 Weak transcription K562 blood
16 chr4:47840000-47852800 Weak transcription Brain Anterior Caudate brain
17 chr4:47840000-47854600 Weak transcription Placenta Amnion Placenta Amnion
18 chr4:47840000-47855600 Weak transcription Primary hematopoietic stem cells short term culture blood
19 chr4:47840000-47874600 Weak transcription Brain Substantia Nigra brain
20 chr4:47840000-47874800 Weak transcription Brain Cingulate Gyrus brain
21 chr4:47840000-47875400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr4:47840000-47875600 Weak transcription Rectal Smooth Muscle rectum
23 chr4:47840000-47886800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
24 chr4:47840200-47841600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
25 chr4:47840200-47841600 Enhancers Primary T helper cells fromperipheralblood blood
26 chr4:47840200-47841800 Enhancers Primary T helper cells PMA-I stimulated --
27 chr4:47840200-47843600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
28 chr4:47840200-47845600 Weak transcription Dnd41 blood
29 chr4:47840200-47845800 Weak transcription Duodenum Mucosa Duodenum
30 chr4:47840200-47845800 Weak transcription Rectal Mucosa Donor 29 rectum
31 chr4:47840200-47845800 Weak transcription Sigmoid Colon Sigmoid Colon
32 chr4:47840200-47846000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
33 chr4:47840200-47846000 Weak transcription Fetal Muscle Trunk muscle
34 chr4:47840200-47846400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
35 chr4:47840200-47846600 Weak transcription Primary T killer memory cells from peripheral blood blood
36 chr4:47840200-47846600 Weak transcription Fetal Stomach stomach
37 chr4:47840200-47849400 Weak transcription Primary T cells fromperipheralblood blood
38 chr4:47840200-47852800 Weak transcription Fetal Kidney kidney
39 chr4:47840200-47854000 Weak transcription Primary T killer naive cells fromperipheralblood blood
40 chr4:47840200-47855600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
41 chr4:47840200-47866600 Weak transcription Esophagus oesophagus
42 chr4:47840200-47867000 Weak transcription Cortex derived primary cultured neurospheres brain
43 chr4:47840200-47869600 Weak transcription Duodenum Smooth Muscle Duodenum
44 chr4:47840200-47874600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
45 chr4:47840200-47874800 Weak transcription Psoas Muscle Psoas
46 chr4:47840200-47881600 Weak transcription Stomach Mucosa stomach
47 chr4:47840200-47885200 Weak transcription Aorta Aorta
48 chr4:47840200-47885800 Weak transcription Pancreas Pancrea
49 chr4:47840400-47841800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
50 chr4:47840400-47841800 Enhancers Primary T regulatory cells fromperipheralblood blood

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Last update: Aug 31, 2015