Variant report

Variant rs6452414
Chromosome Location chr5:80754434-80754435
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:78 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:80703200-80779200 Weak transcription Sigmoid Colon Sigmoid Colon
2 chr5:80709200-80755200 Weak transcription Monocytes-CD14+_RO01746 blood
3 chr5:80713600-80769200 Weak transcription Esophagus oesophagus
4 chr5:80716200-80767800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
5 chr5:80716800-80768400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
6 chr5:80717200-80769200 Weak transcription Right Ventricle heart
7 chr5:80718000-80768800 Weak transcription Primary T cells fromperipheralblood blood
8 chr5:80718400-80754800 Weak transcription Fetal Muscle Trunk muscle
9 chr5:80718400-80755000 Weak transcription GM12878-XiMat blood
10 chr5:80719000-80769200 Weak transcription HSMMtube muscle
11 chr5:80722000-80754800 Weak transcription HSMM muscle
12 chr5:80722400-80754800 Weak transcription Stomach Smooth Muscle stomach
13 chr5:80722400-80755200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
14 chr5:80722400-80768800 Weak transcription Colon Smooth Muscle Colon
15 chr5:80722400-80768800 Weak transcription Fetal Brain Female brain
16 chr5:80722600-80767600 Weak transcription Skeletal Muscle Female skeletal muscle
17 chr5:80722600-80768000 Weak transcription Fetal Adrenal Gland Adrenal Gland
18 chr5:80722600-80768200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
19 chr5:80722600-80769000 Weak transcription Brain Hippocampus Middle brain
20 chr5:80722600-80769000 Weak transcription Brain Inferior Temporal Lobe brain
21 chr5:80722600-80769000 Weak transcription Fetal Brain Male brain
22 chr5:80722600-80769000 Weak transcription Psoas Muscle Psoas
23 chr5:80722600-80769200 Weak transcription Brain Cingulate Gyrus brain
24 chr5:80722800-80755200 Weak transcription Duodenum Smooth Muscle Duodenum
25 chr5:80725400-80755200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
26 chr5:80729600-80769200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
27 chr5:80729800-80769200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
28 chr5:80730600-80767800 Weak transcription Primary T helper naive cells fromperipheralblood blood
29 chr5:80731400-80768800 Weak transcription Fetal Kidney kidney
30 chr5:80731800-80769200 Weak transcription Primary T helper cells fromperipheralblood blood
31 chr5:80733600-80756000 Weak transcription Primary T helper cells PMA-I stimulated --
32 chr5:80735400-80778600 Weak transcription Aorta Aorta
33 chr5:80736000-80771200 Weak transcription NHDF-Ad bronchial
34 chr5:80736400-80768800 Weak transcription Fetal Intestine Large intestine
35 chr5:80738200-80768400 Weak transcription Brain Germinal Matrix brain
36 chr5:80739200-80769000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
37 chr5:80739600-80768800 Weak transcription Skeletal Muscle Male skeletal muscle
38 chr5:80739800-80758600 Strong transcription Dnd41 blood
39 chr5:80739800-80773200 Strong transcription Fetal Thymus thymus
40 chr5:80740400-80768000 Weak transcription Left Ventricle heart
41 chr5:80740400-80769400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
42 chr5:80744000-80754800 Weak transcription Brain Anterior Caudate brain
43 chr5:80745200-80771400 Weak transcription Gastric stomach
44 chr5:80746800-80769000 Weak transcription Pancreas Pancrea
45 chr5:80747000-80768800 Weak transcription HUES64 Cell Line embryonic stem cell
46 chr5:80747000-80769600 Weak transcription iPS-18 Cell Line embryonic stem cell
47 chr5:80747200-80768800 Weak transcription HUES48 Cell Line embryonic stem cell
48 chr5:80747200-80768800 Weak transcription Rectal Mucosa Donor 29 rectum
49 chr5:80747200-80769600 Weak transcription HMEC breast
50 chr5:80748200-80757000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived

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