Variant report

Variant	rs6464840
Chromosome Location	chr7:147508829-147508830
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs10266920	0.93[CHB][hapmap];0.82[ASN][1000 genomes]
rs10267819	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10271363	0.94[CHB][hapmap];0.90[YRI][hapmap];0.85[AFR][1000 genomes];0.82[ASN][1000 genomes]
rs12532879	0.81[ASN][1000 genomes]
rs1404732	0.94[CHB][hapmap];0.82[ASN][1000 genomes]
rs6464841	0.95[YRI][hapmap]
rs7785374	0.95[YRI][hapmap]
rs7785839	0.95[YRI][hapmap]
rs851668	0.96[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv933973	chr7:147438206-147549993	Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	n/a
2	nsv889397	chr7:147471710-147585819	Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	n/a
3	esv3432645	chr7:147508644-147509119	Weak transcription	n/a	n/a	inside rSNPs	n/a

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:147506800-147509600	Weak transcription	Ovary	ovary

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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