The 2.0 version of rSNPBase

Variant report

Variant rs6466030
Chromosome Location chr7:104598448-104598449
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:63 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:104584600-104619000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
2 chr7:104587200-104599000 Weak transcription Duodenum Smooth Muscle Duodenum
3 chr7:104587200-104600800 Weak transcription Primary neutrophils fromperipheralblood blood
4 chr7:104587200-104623600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
5 chr7:104591600-104604600 Weak transcription Fetal Kidney kidney
6 chr7:104595600-104599400 Enhancers Primary hematopoietic stem cells short term culture blood
7 chr7:104595600-104599400 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
8 chr7:104595600-104599400 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
9 chr7:104595600-104599400 Enhancers Stomach Mucosa stomach
10 chr7:104595600-104599400 Enhancers NHDF-Ad bronchial
11 chr7:104595600-104605600 Enhancers Primary monocytes fromperipheralblood blood
12 chr7:104595800-104599400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
13 chr7:104595800-104599400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
14 chr7:104595800-104601200 Enhancers Monocytes-CD14+_RO01746 blood
15 chr7:104596200-104599400 Enhancers Primary hematopoietic stem cells blood
16 chr7:104596200-104599400 Enhancers Colon Smooth Muscle Colon
17 chr7:104596200-104601200 Weak transcription Adipose Nuclei Adipose
18 chr7:104596400-104599400 Enhancers NHLF lung
19 chr7:104596400-104599600 Enhancers Fetal Intestine Small intestine
20 chr7:104596600-104599400 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
21 chr7:104596800-104599400 Enhancers Muscle Satellite Cultured Cells --
22 chr7:104596800-104599400 Enhancers Stomach Smooth Muscle stomach
23 chr7:104596800-104599400 Enhancers Osteobl bone
24 chr7:104597000-104599400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
25 chr7:104597000-104599400 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
26 chr7:104597000-104599600 Enhancers Fetal Stomach stomach
27 chr7:104597200-104599400 Enhancers Rectal Mucosa Donor 31 rectum
28 chr7:104597200-104608200 Weak transcription Primary T helper cells fromperipheralblood blood
29 chr7:104597800-104599200 Enhancers K562 blood
30 chr7:104597800-104599400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
31 chr7:104597800-104601000 Weak transcription Thymus Thymus
32 chr7:104597800-104601200 Weak transcription Skeletal Muscle Male skeletal muscle
33 chr7:104597800-104606200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
34 chr7:104598000-104599400 Enhancers Colonic Mucosa Colon
35 chr7:104598000-104599400 Enhancers Fetal Intestine Large intestine
36 chr7:104598000-104601000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
37 chr7:104598000-104601200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
38 chr7:104598000-104601200 Weak transcription NHEK skin
39 chr7:104598000-104601600 Weak transcription Right Atrium heart
40 chr7:104598000-104602800 Weak transcription Primary T regulatory cells fromperipheralblood blood
41 chr7:104598000-104603000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
42 chr7:104598000-104603400 Weak transcription Skeletal Muscle Female skeletal muscle
43 chr7:104598000-104619800 Weak transcription Primary T cells from cord blood blood
44 chr7:104598000-104621600 Weak transcription Primary T helper naive cells from peripheral blood blood
45 chr7:104598200-104598600 Weak transcription Lung lung
46 chr7:104598200-104599000 Weak transcription Primary B cells from peripheral blood blood
47 chr7:104598200-104600600 Weak transcription Primary B cells from cord blood blood
48 chr7:104598200-104601000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
49 chr7:104598200-104601200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
50 chr7:104598200-104601200 Weak transcription Sigmoid Colon Sigmoid Colon

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015