Variant report

Variant	rs6470725
Chromosome Location	chr8:130379239-130379240
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:130370408..130372069-chr8:130377416..130380412,2	K562	blood:

Extended variants
information (count: 23 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs11994365	1.00[CEU][hapmap];0.92[CHB][hapmap];0.82[JPT][hapmap];0.82[AMR][1000 genomes];0.98[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12545472	1.00[CEU][hapmap];0.92[CHB][hapmap];0.82[JPT][hapmap];0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12547938	0.84[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs13275612	1.00[CEU][hapmap];0.91[CHB][hapmap];0.84[JPT][hapmap];0.98[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs13276288	1.00[CEU][hapmap];1.00[CHB][hapmap];0.82[JPT][hapmap];0.83[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1469626	0.82[AMR][1000 genomes];0.98[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs35761135	0.90[ASN][1000 genomes]
rs3943813	1.00[CEU][hapmap];0.92[CHB][hapmap];0.82[JPT][hapmap];0.82[AMR][1000 genomes];0.98[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6470723	1.00[CEU][hapmap];0.92[CHB][hapmap];0.82[JPT][hapmap];0.98[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6470724	0.82[AMR][1000 genomes];0.96[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6990827	1.00[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6996179	1.00[CEU][hapmap];1.00[CHB][hapmap];0.84[JPT][hapmap];0.88[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7016209	1.00[CEU][hapmap];1.00[CHB][hapmap];0.82[JPT][hapmap];0.88[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7017330	1.00[CEU][hapmap];0.91[CHB][hapmap];0.81[JPT][hapmap];0.98[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7821871	1.00[CEU][hapmap];1.00[CHB][hapmap];0.82[JPT][hapmap];0.83[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7821921	0.88[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7822142	0.88[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7822160	1.00[CEU][hapmap];1.00[CHB][hapmap];0.81[JPT][hapmap];0.82[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7830668	1.00[CEU][hapmap];0.91[CHB][hapmap];0.81[JPT][hapmap];0.81[AMR][1000 genomes];0.97[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7846284	1.00[CEU][hapmap];0.91[CHB][hapmap];0.81[JPT][hapmap];0.82[AMR][1000 genomes];0.98[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7846684	1.00[CEU][hapmap];0.91[CHB][hapmap];0.81[JPT][hapmap];0.81[AMR][1000 genomes];0.97[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs891837	1.00[YRI][hapmap]
rs9650103	1.00[CEU][hapmap];1.00[CHB][hapmap];0.81[JPT][hapmap];0.83[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:130369400-130383800	Strong transcription	K562	blood
2	chr8:130375400-130379400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr8:130375600-130379600	Weak transcription	Primary neutrophils fromperipheralblood	blood
4	chr8:130377400-130383800	Enhancers	Dnd41	blood
5	chr8:130378200-130379800	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
6	chr8:130378200-130380000	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
7	chr8:130378200-130380200	Enhancers	NHEK	skin
8	chr8:130378200-130380400	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
9	chr8:130378200-130381000	Enhancers	HMEC	breast
10	chr8:130378200-130381600	Genic enhancers	Fetal Thymus	thymus
11	chr8:130378600-130379800	Enhancers	Muscle Satellite Cultured Cells	--
12	chr8:130379200-130379800	Enhancers	Thymus	Thymus
13	chr8:130379200-130379800	Enhancers	HSMM	muscle

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