The 2.0 version of rSNPBase

Variant report

Variant rs6511192
Chromosome Location chr19:21290530-21290531
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:103 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:21265600-21295800 Weak transcription Small Intestine intestine
2 chr19:21265600-21300000 Weak transcription Brain Angular Gyrus brain
3 chr19:21265600-21305200 Weak transcription Psoas Muscle Psoas
4 chr19:21265800-21290600 Weak transcription Adipose Nuclei Adipose
5 chr19:21265800-21297200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
6 chr19:21265800-21297200 Weak transcription Brain Cingulate Gyrus brain
7 chr19:21265800-21299600 Weak transcription Brain Inferior Temporal Lobe brain
8 chr19:21265800-21299800 Weak transcription Skeletal Muscle Female skeletal muscle
9 chr19:21265800-21302200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
10 chr19:21265800-21302800 Weak transcription Fetal Muscle Trunk muscle
11 chr19:21265800-21303000 Weak transcription ES-WA7 Cell Line embryonic stem cell
12 chr19:21266000-21290800 Weak transcription Brain Anterior Caudate brain
13 chr19:21266000-21290800 Weak transcription Rectal Mucosa Donor 29 rectum
14 chr19:21266000-21290800 Weak transcription Rectal Mucosa Donor 31 rectum
15 chr19:21266000-21292600 Weak transcription Fetal Kidney kidney
16 chr19:21266000-21297400 Weak transcription HUVEC blood vessel
17 chr19:21266200-21292400 Weak transcription Primary T cells from cord blood blood
18 chr19:21266200-21296600 Weak transcription Primary T helper cells PMA-I stimulated --
19 chr19:21266200-21301600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
20 chr19:21266800-21292600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
21 chr19:21267000-21292800 Strong transcription HUES48 Cell Line embryonic stem cell
22 chr19:21267200-21295800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
23 chr19:21271200-21296000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
24 chr19:21274400-21291200 Weak transcription Primary T regulatory cells fromperipheralblood blood
25 chr19:21275400-21292800 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
26 chr19:21275400-21294200 Weak transcription Duodenum Smooth Muscle Duodenum
27 chr19:21275400-21297200 Weak transcription Rectal Smooth Muscle rectum
28 chr19:21275400-21301400 Weak transcription Fetal Brain Male brain
29 chr19:21275400-21304600 Weak transcription Stomach Smooth Muscle stomach
30 chr19:21275600-21290800 Weak transcription Muscle Satellite Cultured Cells --
31 chr19:21275600-21293000 Weak transcription Primary B cells from cord blood blood
32 chr19:21275600-21299000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
33 chr19:21276200-21293000 Strong transcription HUES64 Cell Line embryonic stem cell
34 chr19:21276400-21293000 Strong transcription HUES6 Cell Line embryonic stem cell
35 chr19:21278200-21292600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
36 chr19:21280000-21297400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
37 chr19:21281600-21291600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
38 chr19:21281800-21300000 Weak transcription HMEC breast
39 chr19:21282400-21291200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
40 chr19:21282600-21292400 Weak transcription Sigmoid Colon Sigmoid Colon
41 chr19:21282800-21293600 Strong transcription Primary hematopoietic stem cells short term culture blood
42 chr19:21283200-21297200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
43 chr19:21283600-21292800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
44 chr19:21284200-21302600 Weak transcription Brain Substantia Nigra brain
45 chr19:21284600-21290600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
46 chr19:21284600-21290600 Weak transcription A549 lung
47 chr19:21284600-21296600 Weak transcription K562 blood
48 chr19:21284600-21306800 Weak transcription Left Ventricle heart
49 chr19:21284800-21291600 Weak transcription Osteobl bone
50 chr19:21285000-21290800 Weak transcription HSMMtube muscle

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Last update: Aug 31, 2015